CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PV04_07860
(
Capronia semiimmersa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PV04_07860
T127359_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FGRRES_01877
M01175_2.00
Fusarium graminearum
NNNRGCTGNN
NNCAGCYNNN
PBM
Lambert et al.(2019)
pTH10260
0.819
0.940
NCU03699
M01878_2.00
Neurospora crassa
NNVRGCTGDN
NHCAGCYBNN
PBM
Weirauch et al.(2014)
pTH8956
0.819
0.940
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIW65616
C2H2 ZF
259
279
RCPHPDCGKVFKDLKAHMLTH
KIW65616
C2H2 ZF
286
312
KCPILTCEYNLKGFARKYDKNRHTLTH
KIW65616
C2H2 ZF
317
347
MVCGFCPGSGSPAEKSFNRADVFKRHLTSVH
KIW65617
C2H2 ZF
137
157
RCPHPDCGKVFKDLKAHMLTH
KIW65617
C2H2 ZF
164
190
KCPILTCEYNLKGFARKYDKNRHTLTH
KIW65617
C2H2 ZF
195
225
MVCGFCPGSGSPAEKSFNRADVFKRHLTSVH
KIW65617
C2H2 ZF
256
275
KCSTCSATFNNAQDFYEHLD
Links
Other
C2H2 ZF
family TFs
Other
Capronia semiimmersa
TFs
103 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy