CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PV07_09402
(
Cladophialophora immunda
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PV07_09402
T127533_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU02666
M01875_2.00
Neurospora crassa
NNNMGCCACN
NGTGGCKNNN
PBM
Weirauch et al.(2014)
pTH8838
0.811
0.897
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIW26297
C2H2 ZF
297
319
HRCPYCATEFTRHHNLKSHLLTH
KIW26297
C2H2 ZF
325
347
YVCSTCSSRFRRLHDLKRHTKLH
KIW26297
C2H2 ZF
353
374
HICPKCGRKFARGDALARHNKG
KIW26298
C2H2 ZF
252
274
HRCPYCATEFTRHHNLKSHLLTH
KIW26298
C2H2 ZF
280
302
YVCSTCSSRFRRLHDLKRHTKLH
KIW26298
C2H2 ZF
308
329
HICPKCGRKFARGDALARHNKG
KIW26299
C2H2 ZF
252
274
HRCPYCATEFTRHHNLKSHLLTH
KIW26299
C2H2 ZF
280
302
YVCSTCSSRFRRLHDLKRHTKLH
KIW26299
C2H2 ZF
308
329
HICPKCGRKFARGDALARHNKG
KIW26300
C2H2 ZF
252
274
HRCPYCATEFTRHHNLKSHLLTH
KIW26300
C2H2 ZF
280
302
YVCSTCSSRFRRLHDLKRHTKLH
KIW26300
C2H2 ZF
308
329
HICPKCGRKFARGDALARHNKG
KIW26301
C2H2 ZF
246
268
YVCSTCSSRFRRLHDLKRHTKLH
KIW26301
C2H2 ZF
274
295
HICPKCGRKFARGDALARHNKG
Links
Other
C2H2 ZF
family TFs
Other
Cladophialophora immunda
TFs
136 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy