CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PV09_06507
(
Verruconis gallopava
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PV09_06507
T127628_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU03975
M01879_2.00
Neurospora crassa
NNRCWYDDNN
NNHHRWGYNN
PBM
Weirauch et al.(2014)
pTH9677
0.815
0.946
HCBG_04116
M01448_2.00
Histoplasma capsulatum
RHCHGWGCDB
VHGCWCDGDY
PBM
Najafabadi et al.(2015a)
pTH11149
0.810
0.957
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIW01998
C2H2 ZF
185
207
FACSTCGKGFARRSDLARHERIH
KIW01998
C2H2 ZF
213
237
HVCDYPGCGKQFIQRSALTVHMRVH
KIW01998
C2H2 ZF
243
265
HMCERCGKPFSDSSSLARHRRIH
KIW01998
C2H2 ZF
271
295
YKCPYADCQKTFTRRTTLTRHQNHH
KIW01999
C2H2 ZF
114
136
FACSTCGKGFARRSDLARHERIH
KIW01999
C2H2 ZF
142
166
HVCDYPGCGKQFIQRSALTVHMRVH
KIW01999
C2H2 ZF
172
194
HMCERCGKPFSDSSSLARHRRIH
KIW01999
C2H2 ZF
200
224
YKCPYADCQKTFTRRTTLTRHQNHH
Links
Other
C2H2 ZF
family TFs
Other
Verruconis gallopava
TFs
131 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy