CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PVAR5_7714
(
Byssochlamys spectabilis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PVAR5_7714
T127768_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU06907
M01889_2.00
Neurospora crassa
YYMGCCHCNN
NNGDGGCKRR
PBM
Weirauch et al.(2014)
pTH9682
0.769
0.800
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GAD99009
C2H2 ZF
434
458
WVCLHPGCDRRFGRKENIKSHIQTH
GAD99009
C2H2 ZF
464
486
YKCNHCDKCFVRGHDLKRHAKIH
GAD99009
C2H2 ZF
493
512
ECLCGNVFARHDALTRHRQR
Links
Other
C2H2 ZF
family TFs
Other
Byssochlamys spectabilis
TFs
73 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy