CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
RHTO_02680
(
Rhodosporidium toruloides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
RHTO_02680
T127823_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMS24954
C2H2 ZF
872
901
RCDHTNSDGSTCGVIFRRPYDLARHKETIH
EMS24954
C2H2 ZF
915
939
WKCEQCGGTFSRKDALLRHGRIRGH
Links
Other
C2H2 ZF
family TFs
Other
Rhodosporidium toruloides
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RTG_01581
Rhodotorula glutinis
RTG_01581
N
0.827
PFL1_05776
Pseudozyma flocculosa
PFL1_05776
N
0.798
PAN0_012c4580
Pseudozyma antarctica
PAN0_012c4580
N
0.775
PaG_03487
Pseudozyma aphidis
PaG_03487
N
0.775
sr15356
Sporisorium reilianum
sr15356
N
0.765
UHOR_06975
Ustilago hordei
UHOR_06975
N
0.765
PHSY_003652
Pseudozyma hubeiensis
PHSY_003652
N
0.765
PSEUBRA_SCAF11g01209
Pseudozyma brasiliensis
PSEUBRA_SCAF11g01209
N
0.765