RTG_01578 (Rhodotorula glutinis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 RTG_01578 T128066_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU05064
M01883_2.00 		Neurospora crassa
NNYMCCTKD
HMAGGKRNN		 PBM
Weirauch et al.(2014)
pTH8949 		0.781 0.756
HCBG_02507
M01447_2.00 		Histoplasma capsulatum
NNCCCCTKD
HMAGGGGNN		 PBM
Najafabadi et al.(2015a)
pTH10217 		0.781 0.733
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EGU12528 C2H2 ZF 425 450
EGU12528 C2H2 ZF 456 478

Links

Other C2H2 ZF family TFs
Other Rhodotorula glutinis TFs

Invalid Input OrderBy

164 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action