Sb01g003280 (Sorghum bicolor)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Sb01g003280 T128199_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT5G04390
M01857_2.00
Arabidopsis thaliana
NNHRSWN

NWSYDNN
PBM
Weirauch et al.(2014)
pTH7158
0.786 0.761
AT5G04390
M06819_2.00
Arabidopsis thaliana
HHHHWHCACTN

NAGTGDWDDDD
Dap-seq
OMalley et al.(2016)
At5g04390_col200_a
0.786 0.761
AT5G03510
M00860_2.00
Arabidopsis thaliana
NNHRSWN

NWSYDNN
PBM
Franco-Zorrilla et al.(2014)
ZAT14
0.785 0.717
ZAT7
M01855_2.00
Arabidopsis thaliana
NVDBRCACTNNNN

NNNNAGTGYVHBN
PBM
Weirauch et al.(2014)
pTH7540
0.762 0.761
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb01g003280.1 C2H2 ZF 58 85
Sb01g003280.1 C2H2 ZF 125 147

Links

Other C2H2 ZF family TFs
Other Sorghum bicolor TFs

Invalid Input OrderBy

377 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action