CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb01g031920
(
Sorghum bicolor
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
Sb01g031920
T128204_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb01g031920.1
C2H2 ZF
52
74
FRCSVCGKAFASHQALGGHKASH
Sb01g031920.1
C2H2 ZF
113
135
HRCTVCHRSFATGQALGGHKRCH
Links
Other
C2H2 ZF
family TFs
Other
Sorghum bicolor
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OS11G0340477
Oryza sativa
OS11G0340477
N
0.822
LPERR03G19190
Leersia perrieri
LPERR03G19190
N
0.822
ORGLA03G0210200
Oryza glaberrima
ORGLA03G0210200
N
0.822
ORUFI03G23230
Oryza rufipogon
ORUFI03G23230
N
0.822
OS03G0437100
Oryza sativa
OS03G0437100
N
0.822
OBART03G22560
Oryza barthii
OBART03G22560
N
0.822
OB03G31790
Oryza brachyantha
OB03G31790
N
0.822
OPUNC03G21190
Oryza punctata
OPUNC03G21190
N
0.822
GRMZM5G883760
Zea mays
GRMZM5G883760
N
0.822
Traes_2DS_11ADF414D
Triticum aestivum
Traes_2DS_11ADF414D
N
0.822
BGIOSGA010470
Oryza indica
BGIOSGA010470
N
0.822
BGIOSGA010469
Oryza indica
BGIOSGA010469
N
0.822
BRADI2G49250
Brachypodium distachyon
BRADI2G49250
N
0.822
F775_12743
Aegilops tauschii
F775_12743
N
0.822
OGLUM03G23340
Oryza glumaepatula
OGLUM03G23340
N
0.822
Si037516m.g
Setaria italica
Si037516m.g
N
0.822
Traes_2BS_494F02775
Triticum aestivum
Traes_2BS_494F02775
N
0.822
GSMUA_Achr10G31400_001
Musa acuminata
GSMUA_Achr10G31400_001
N
0.785
GSMUA_Achr7G20260_001
Musa acuminata
GSMUA_Achr7G20260_001
N
0.781
Si037343m.g
Setaria italica
Si037343m.g
N
0.781
ORGLA03G0210300
Oryza glaberrima
ORGLA03G0210300
I
0.776
OS03G0437200
Oryza sativa
OS03G0437200
I
0.776
ORUFI03G23240
Oryza rufipogon
ORUFI03G23240
I
0.776
OLONG_027628
Oryza longistaminata
OLONG_027628
I
0.776
OBART03G22570
Oryza barthii
OBART03G22570
I
0.776
OGLUM03G23350
Oryza glumaepatula
OGLUM03G23350
I
0.776
BGIOSGA010468
Oryza indica
BGIOSGA010468
I
0.776
OB03G31780
Oryza brachyantha
OB03G31780
I
0.776
GSMUA_Achr6G34890_001
Musa acuminata
GSMUA_Achr6G34890_001
I
0.770
PDK_20s1446781g002
Phoenix dactylifera
PDK_20s1446781g002
N
0.769
Traes_4BS_FE945D2FC
Triticum aestivum
Traes_4BS_FE945D2FC
I
0.767
OPUNC12G15600
Oryza punctata
OPUNC12G15600
I
0.767
OS12G0583700
Oryza sativa
OS12G0583700
I
0.767
Bo7g117320
Brassica oleracea
Bo7g117320
I
0.761
evm.TU.supercontig_249.7
Carica papaya
evm.TU.supercontig_249.7
I
0.761
Cagra.2350s0072
Capsella grandiflora
Cagra.2350s0072
I
0.761
LPERR03G21480
Leersia perrieri
LPERR03G21480
I
0.758
MLOC_51405
Hordeum vulgare
MLOC_51405
I
0.758
GRMZM2G338056
Zea mays
GRMZM2G338056
I
0.757
Sb05g027450
Sorghum bicolor
Sb05g027450
I
0.757
GLYMA10G40400
Glycine max
GLYMA10G40400
I
0.756
Ca_05641
Cicer arietinum
Ca_05641
I
0.756
Eucgr.F02262
Eucalyptus grandis
Eucgr.F02262
I
0.756