Sb01g034110 (Sorghum bicolor)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Sb01g034110 T128205_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZFP5
M01851_2.00
Arabidopsis thaliana
DSWTNNNN

NNNNAWSH
PBM
Weirauch et al.(2014)
pTH7539
0.764 0.652
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb01g034110.1 C2H2 ZF 28 50

Links

Other C2H2 ZF family TFs
Other Sorghum bicolor TFs

92 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GRMZM2G403590 Zea mays GRMZM2G403590 I 0.827
GRMZM2G115388 Zea mays GRMZM2G115388 I 0.827
GRMZM2G161255 Zea mays GRMZM2G161255 I 0.824
Pavir.Ia03096 Panicum virgatum Pavir.Ia03096 I 0.824
Pavir.Ib01803 Panicum virgatum Pavir.Ib01803 I 0.824
Si037914m.g Setaria italica Si037914m.g I 0.824
GRMZM2G037574 Zea mays GRMZM2G037574 I 0.822
PK10012.1 Cannabis sativa PK10012.1 I 0.814
gene05169-v1.0-hybrid Fragaria vesca gene05169-v1.0-hybrid I 0.814
Pavir.Ia03263 Panicum virgatum Pavir.Ia03263 I 0.779
Pavir.Ib01788 Panicum virgatum Pavir.Ib01788 I 0.779
SELMODRAFT_405785 Selaginella moellendorffii SELMODRAFT_405785 I 0.776
SELMODRAFT_450813 Selaginella moellendorffii SELMODRAFT_450813 I 0.776
ORGLA09G0084000 Oryza glaberrima ORGLA09G0084000 I 0.774
OGLUM09G11630 Oryza glumaepatula OGLUM09G11630 I 0.774
OPUNC09G09720 Oryza punctata OPUNC09G09720 I 0.774
OMERI09G08780 Oryza meridionalis OMERI09G08780 I 0.774
ONIVA09G10990 Oryza nivara ONIVA09G10990 I 0.774
OLONG_006424 Oryza longistaminata OLONG_006424 I 0.774
Sb02g025390 Sorghum bicolor Sb02g025390 I 0.774
Traes_5DL_B97546DA11 Triticum aestivum Traes_5DL_B97546DA11 I 0.774
Traes_5AL_81EFE5211 Triticum aestivum Traes_5AL_81EFE5211 I 0.774
TRIUR3_22340 Triticum urartu TRIUR3_22340 I 0.774
Si031489m.g Setaria italica Si031489m.g I 0.774
OS09G0431900 Oryza sativa OS09G0431900 I 0.774
OBART09G11250 Oryza barthii OBART09G11250 I 0.774
ORUFI09G12050 Oryza rufipogon ORUFI09G12050 I 0.774
OB09G17800 Oryza brachyantha OB09G17800 I 0.774
GRMZM2G108818 Zea mays GRMZM2G108818 I 0.774
Traes_5BL_3E6B0CD61 Triticum aestivum Traes_5BL_3E6B0CD61 I 0.774
Pavir.Bb02239 Panicum virgatum Pavir.Bb02239 I 0.774
BGIOSGA029710 Oryza indica BGIOSGA029710 I 0.774
BRADI4G30920 Brachypodium distachyon BRADI4G30920 I 0.774
LPERR09G07930 Leersia perrieri LPERR09G07930 I 0.774
Pavir.J36164 Panicum virgatum Pavir.J36164 I 0.774
MLOC_4507 Hordeum vulgare MLOC_4507 I 0.774
Pavir.Ib01877 Panicum virgatum Pavir.Ib01877 I 0.769
Cagra.3166s0007 Capsella grandiflora Cagra.3166s0007 I 0.769
Bostr.2902s0137 Boechera stricta Bostr.2902s0137 I 0.769
Carubv10002570m.g Capsella rubella Carubv10002570m.g I 0.769
Thhalv10015891m.g Eutrema salsugineum Thhalv10015891m.g I 0.769
Bostr.13129s0308 Boechera stricta Bostr.13129s0308 I 0.769
orange1.1g046965m.g Citrus sinensis orange1.1g046965m.g I 0.769
evm.TU.supercontig_116.88 Carica papaya evm.TU.supercontig_116.88 I 0.769
Ciclev10003844m.g Citrus clementina Ciclev10003844m.g I 0.769
evm.TU.supercontig_1307.1 Carica papaya evm.TU.supercontig_1307.1 I 0.769
Lus10017229.g Linum usitatissimum Lus10017229.g I 0.769
GIS2 Arabidopsis thaliana AT5G06650 I 0.769
Carubv10018785m.g Capsella rubella Carubv10018785m.g I 0.769
Carubv10003820m.g Capsella rubella Carubv10003820m.g I 0.769
TCM_044725 Theobroma cacao TCM_044725 I 0.769
Bo2g007320 Brassica oleracea Bo2g007320 I 0.769
LPERR08G07840 Leersia perrieri LPERR08G07840 I 0.769
PGSC0003DMG400011450 Solanum tuberosum PGSC0003DMG400011450 I 0.769
AMTR_s00022p00165560 Amborella trichopoda AMTR_s00022p00165560 I 0.769
GLYMA06G14783 Glycine max GLYMA06G14783 I 0.769
GIS2 Arabidopsis lyrata fgenesh2_kg.6__609__AT5G06650.1 I 0.769
Bo9g166240 Brassica oleracea Bo9g166240 I 0.769
Bra008787 Brassica rapa Bra008787 I 0.769
Bra028724 Brassica rapa Bra028724 I 0.769
Solyc10g078970.1 Solanum lycopersicum Solyc10g078970.1 I 0.769
GRMZM2G703281 Zea mays GRMZM2G703281 I 0.769
Solyc10g078990.1 Solanum lycopersicum Solyc10g078990.1 I 0.769
Ca_08116 Cicer arietinum Ca_08116 I 0.767
Pavir.Ha01090 Panicum virgatum Pavir.Ha01090 I 0.767
Si028367m.g Setaria italica Si028367m.g I 0.767
evm.TU.supercontig_51.84 Carica papaya evm.TU.supercontig_51.84 I 0.767
GLYMA03G37610 Glycine max GLYMA03G37610 I 0.766
MDP0000165710 Malus domestica MDP0000165710 I 0.766
BRADI4G37760 Brachypodium distachyon BRADI4G37760 I 0.766
chr5.LjT04G07.90.nd Lotus japonicus chr5.LjT04G07.90.nd I 0.766
Traes_5DL_DD8A0F6BE Triticum aestivum Traes_5DL_DD8A0F6BE I 0.766
TRIUR3_34498 Triticum urartu TRIUR3_34498 I 0.766
MDP0000121370 Malus domestica MDP0000121370 I 0.766
F775_42450 Aegilops tauschii F775_42450 I 0.766
GLYMA19G40220 Glycine max GLYMA19G40220 I 0.766
SELMODRAFT_450832 Selaginella moellendorffii SELMODRAFT_450832 I 0.766
SELMODRAFT_450839 Selaginella moellendorffii SELMODRAFT_450839 I 0.766
Pm008291 Prunus mume Pm008291 I 0.766
Bo9g011450 Brassica oleracea Bo9g011450 I 0.766
cassava45710.m1 Manihot esculenta cassava45710.m1 I 0.766
gene05263-v1.0-hybrid Fragaria vesca gene05263-v1.0-hybrid I 0.766
Carubv10003685m.g Capsella rubella Carubv10003685m.g I 0.764
Thhalv10008773m.g Eutrema salsugineum Thhalv10008773m.g I 0.764
Cagra.1504s0017 Capsella grandiflora Cagra.1504s0017 I 0.764
cassava44297.m1 Manihot esculenta cassava44297.m1 I 0.764
30045.m000471 Ricinus communis 30045.m000471 I 0.764
Bo8g109510 Brassica oleracea Bo8g109510 I 0.764
VIT_08s0040g00750 Vitis vinifera VIT_08s0040g00750 I 0.764
Bostr.13671s0437 Boechera stricta Bostr.13671s0437 I 0.764
F775_01070 Aegilops tauschii F775_01070 I 0.764
ZFP5 Arabidopsis thaliana AT1G10480 D 0.764