Sb05g027450 (Sorghum bicolor)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Sb05g027450 T128243_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAT7
M01855_2.00 		Arabidopsis thaliana
NVDBRCACTNNNN
NNNNAGTGYVHBN		 PBM
Weirauch et al.(2014)
pTH7540 		0.777 0.717
AT3G46070
M06813_2.00 		Arabidopsis thaliana
HYHHYHTCACTYHHH
DDDRAGTGADRDDRD		 Dap-seq
OMalley et al.(2016)
AT3G46070_col_a 		0.768 0.717
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb05g027450.1 C2H2 ZF 58 80
Sb05g027450.1 C2H2 ZF 108 130

Links

Other C2H2 ZF family TFs
Other Sorghum bicolor TFs

187 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM2G338056 Zea mays GRMZM2G338056 I 0.822
Pavir.Da00814 Panicum virgatum Pavir.Da00814 I 0.816
Si026973m.g Setaria italica Si026973m.g I 0.816
Pavir.Da00815 Panicum virgatum Pavir.Da00815 I 0.816
Si027432m.g Setaria italica Si027432m.g I 0.816
Pavir.J30713 Panicum virgatum Pavir.J30713 I 0.816
Pavir.J14296 Panicum virgatum Pavir.J14296 I 0.816
Pavir.Hb00056 Panicum virgatum Pavir.Hb00056 I 0.810
Pavir.Da01563 Panicum virgatum Pavir.Da01563 I 0.810
Pavir.Hb00003 Panicum virgatum Pavir.Hb00003 I 0.810
Pavir.Ha00194 Panicum virgatum Pavir.Ha00194 I 0.810
Traes_4DS_276818E4F Triticum aestivum Traes_4DS_276818E4F I 0.792
F775_14723 Aegilops tauschii F775_14723 I 0.792
MLOC_76196 Hordeum vulgare MLOC_76196 I 0.791
GSMUA_Achr11G23970_001 Musa acuminata GSMUA_Achr11G23970_001 I 0.790
TRIUR3_01060 Triticum urartu TRIUR3_01060 I 0.789
F775_30896 Aegilops tauschii F775_30896 I 0.789
MLOC_14920 Hordeum vulgare MLOC_14920 I 0.788
Traes_5DL_4B4927090 Triticum aestivum Traes_5DL_4B4927090 I 0.788
ORUFI11G25330 Oryza rufipogon ORUFI11G25330 I 0.786
ORGLA11G0188100 Oryza glaberrima ORGLA11G0188100 I 0.786
OBART11G23480 Oryza barthii OBART11G23480 I 0.786
OB11G27860 Oryza brachyantha OB11G27860 I 0.786
OPUNC11G19830 Oryza punctata OPUNC11G19830 I 0.786
BRADI4G09410 Brachypodium distachyon BRADI4G09410 I 0.786
BGIOSGA033524 Oryza indica BGIOSGA033524 I 0.786
OS11G0702400 Oryza sativa OS11G0702400 I 0.786
F775_08752 Aegilops tauschii F775_08752 I 0.783
Pavir.J03079 Panicum virgatum Pavir.J03079 I 0.781
Lus10040312.g Linum usitatissimum Lus10040312.g I 0.778
OBART05G19310 Oryza barthii OBART05G19310 I 0.777
Carubv10018142m.g Capsella rubella Carubv10018142m.g I 0.777
Cagra.7309s0001 Capsella grandiflora Cagra.7309s0001 I 0.777
Bostr.18473s0333 Boechera stricta Bostr.18473s0333 I 0.777
SapurV1A.0008s0970 Salix purpurea SapurV1A.0008s0970 I 0.777
ORUFI05G20520 Oryza rufipogon ORUFI05G20520 I 0.777
ONIVA05G20190 Oryza nivara ONIVA05G20190 I 0.777
OMERI05G16850 Oryza meridionalis OMERI05G16850 I 0.777
OS05G0460900 Oryza sativa OS05G0460900 I 0.777
OGLUM05G20400 Oryza glumaepatula OGLUM05G20400 I 0.777
ORGLA05G0167500 Oryza glaberrima ORGLA05G0167500 I 0.777
ZAT7 Arabidopsis thaliana AT3G46090 D 0.777
fgenesh2_kg.5__981__AT3G46090.1 Arabidopsis lyrata fgenesh2_kg.5__981__AT3G46090.1 I 0.777
ZAT8 Arabidopsis thaliana AT3G46080 I 0.777
Pavir.Cb00699 Panicum virgatum Pavir.Cb00699 N 0.773
Pavir.Ha00193 Panicum virgatum Pavir.Ha00193 I 0.768
AT3G46070 Arabidopsis thaliana AT3G46070 D 0.768
scaffold_501490.1 Arabidopsis lyrata scaffold_501490.1 I 0.768
Traes_5BL_630A8A142 Triticum aestivum Traes_5BL_630A8A142 I 0.767
F775_18611 Aegilops tauschii F775_18611 I 0.767
Traes_5BL_63AE36D3A Triticum aestivum Traes_5BL_63AE36D3A I 0.767
Traes_5DL_4E890ABF3 Triticum aestivum Traes_5DL_4E890ABF3 I 0.767
Traes_5BL_D53A846BE Triticum aestivum Traes_5BL_D53A846BE I 0.767
Traes_5BL_F74D668D9 Triticum aestivum Traes_5BL_F74D668D9 I 0.767
TRIUR3_15912 Triticum urartu TRIUR3_15912 I 0.767
Bra019477 Brassica rapa Bra019477 I 0.767
F775_30269 Aegilops tauschii F775_30269 I 0.767
Thhalv10002839m.g Eutrema salsugineum Thhalv10002839m.g I 0.767
Bo1g067420 Brassica oleracea Bo1g067420 I 0.767
F775_52290 Aegilops tauschii F775_52290 I 0.767
Cagra.7309s0002 Capsella grandiflora Cagra.7309s0002 I 0.767
Carubv10018774m.g Capsella rubella Carubv10018774m.g I 0.767
BRADI1G03770 Brachypodium distachyon BRADI1G03770 I 0.766
Traes_5BL_3A9D3CEEF Triticum aestivum Traes_5BL_3A9D3CEEF I 0.765
ORUFI03G40740 Oryza rufipogon ORUFI03G40740 I 0.765
ORGLA03G0358100 Oryza glaberrima ORGLA03G0358100 I 0.765
Traes_5BL_3B50B6963 Triticum aestivum Traes_5BL_3B50B6963 I 0.765
F775_18609 Aegilops tauschii F775_18609 I 0.765
OS03G0820300 Oryza sativa OS03G0820300 I 0.765
Traes_5BL_BB99746DD Triticum aestivum Traes_5BL_BB99746DD I 0.765
TRIUR3_01065 Triticum urartu TRIUR3_01065 I 0.765
GSMUA_Achr10G13530_001 Musa acuminata GSMUA_Achr10G13530_001 I 0.765
BGIOSGA013831 Oryza indica BGIOSGA013831 I 0.765
Traes_5DL_9D713AD9C Triticum aestivum Traes_5DL_9D713AD9C I 0.765
Traes_5DL_90F570468 Triticum aestivum Traes_5DL_90F570468 I 0.765
Traes_5BL_6F2D345E2 Triticum aestivum Traes_5BL_6F2D345E2 I 0.765
Traes_5BL_9C687EE11 Triticum aestivum Traes_5BL_9C687EE11 I 0.765
ONIVA03G40710 Oryza nivara ONIVA03G40710 I 0.765
Traes_5BL_56E52A2FC Triticum aestivum Traes_5BL_56E52A2FC N 0.765
BRADI1G03780 Brachypodium distachyon BRADI1G03780 I 0.765
MLOC_19822 Hordeum vulgare MLOC_19822 I 0.765
OMERI03G35870 Oryza meridionalis OMERI03G35870 I 0.765
F775_30895 Aegilops tauschii F775_30895 I 0.765
OGLUM03G38900 Oryza glumaepatula OGLUM03G38900 I 0.765
LPERR03G33230 Leersia perrieri LPERR03G33230 I 0.765
Traes_5BL_8DB8274DB1 Triticum aestivum Traes_5BL_8DB8274DB1 I 0.764
OBART03G39050 Oryza barthii OBART03G39050 I 0.764
Traes_5DL_50E35B4F3 Triticum aestivum Traes_5DL_50E35B4F3 I 0.764
OB03G46010 Oryza brachyantha OB03G46010 I 0.764
OGLUM03G38910 Oryza glumaepatula OGLUM03G38910 I 0.764
Solyc06g075780.1 Solanum lycopersicum Solyc06g075780.1 I 0.764
Si003051m.g Setaria italica Si003051m.g I 0.764
GRMZM2G307402 Zea mays GRMZM2G307402 I 0.764
Si008395m.g Setaria italica Si008395m.g I 0.764
BRADI1G03790 Brachypodium distachyon BRADI1G03790 I 0.764
Si037672m.g Setaria italica Si037672m.g I 0.764
Si037251m.g Setaria italica Si037251m.g I 0.764
MLOC_67028 Hordeum vulgare MLOC_67028 I 0.764
TRIUR3_12166 Triticum urartu TRIUR3_12166 I 0.764
Pavir.Ia00291 Panicum virgatum Pavir.Ia00291 I 0.764
GSMUA_Achr1G06720_001 Musa acuminata GSMUA_Achr1G06720_001 I 0.764
Pavir.Ia00292 Panicum virgatum Pavir.Ia00292 I 0.764
Pavir.J00893 Panicum virgatum Pavir.J00893 I 0.764
Pavir.J00894 Panicum virgatum Pavir.J00894 I 0.764
BGIOSGA013832 Oryza indica BGIOSGA013832 I 0.764
Eucgr.B02398 Eucalyptus grandis Eucgr.B02398 I 0.764
Sb10g031270 Sorghum bicolor Sb10g031270 I 0.764
MLOC_63032 Hordeum vulgare MLOC_63032 I 0.764
TRIUR3_15911 Triticum urartu TRIUR3_15911 I 0.764
GRMZM2G002815 Zea mays GRMZM2G002815 I 0.764
LPERR03G33240 Leersia perrieri LPERR03G33240 I 0.764
Traes_5DL_F269EF70D Triticum aestivum Traes_5DL_F269EF70D I 0.764
Traes_5BL_B038BE0A3 Triticum aestivum Traes_5BL_B038BE0A3 I 0.764
F775_18608 Aegilops tauschii F775_18608 I 0.764
OS03G0820400 Oryza sativa OS03G0820400 I 0.764
OMERI03G35880 Oryza meridionalis OMERI03G35880 I 0.764
F775_22659 Aegilops tauschii F775_22659 I 0.764
ONIVA03G40720 Oryza nivara ONIVA03G40720 I 0.764
F775_17661 Aegilops tauschii F775_17661 I 0.764
ORGLA03G0358200 Oryza glaberrima ORGLA03G0358200 I 0.764
PGSC0003DMG401030312 Solanum tuberosum PGSC0003DMG401030312 I 0.764
Sb01g003280 Sorghum bicolor Sb01g003280 I 0.764
GSMUA_Achr10G06730_001 Musa acuminata GSMUA_Achr10G06730_001 I 0.763
GSMUA_Achr11G21920_001 Musa acuminata GSMUA_Achr11G21920_001 I 0.763
OPUNC01G35470 Oryza punctata OPUNC01G35470 I 0.763
OMERI01G33710 Oryza meridionalis OMERI01G33710 I 0.763
GSMUA_Achr11G02250_001 Musa acuminata GSMUA_Achr11G02250_001 I 0.763
LPERR01G31500 Leersia perrieri LPERR01G31500 I 0.763
ORGLA01G0304700 Oryza glaberrima ORGLA01G0304700 I 0.763
BRADI2G54500 Brachypodium distachyon BRADI2G54500 I 0.763
ONIVA01G41740 Oryza nivara ONIVA01G41740 I 0.763
Pavir.Eb03660 Panicum virgatum Pavir.Eb03660 I 0.763
BGIOSGA004768 Oryza indica BGIOSGA004768 I 0.763
OS01G0839100 Oryza sativa OS01G0839100 I 0.763
OGLUM01G40530 Oryza glumaepatula OGLUM01G40530 I 0.763
GRMZM2G112799 Zea mays GRMZM2G112799 I 0.763
TRAES3BF127400030CFD_g Triticum aestivum TRAES3BF127400030CFD_g I 0.763
Solyc11g073060.1 Solanum lycopersicum Solyc11g073060.1 I 0.763
GRMZM2G376061 Zea mays GRMZM2G376061 I 0.763
Pavir.J14338 Panicum virgatum Pavir.J14338 I 0.763
Sb03g039270 Sorghum bicolor Sb03g039270 I 0.763
OPUNC01G35440 Oryza punctata OPUNC01G35440 I 0.763
Pavir.J04850 Panicum virgatum Pavir.J04850 I 0.763
Pavir.Hb00023 Panicum virgatum Pavir.Hb00023 I 0.762
Pavir.Da01393 Panicum virgatum Pavir.Da01393 I 0.762
Bra017188 Brassica rapa Bra017188 I 0.760
TRIUR3_01063 Triticum urartu TRIUR3_01063 I 0.760
Bo4g030570 Brassica oleracea Bo4g030570 I 0.760
Bo4g186920 Brassica oleracea Bo4g186920 I 0.760
GRMZM2G061626 Zea mays GRMZM2G061626 I 0.759
Lus10024428.g Linum usitatissimum Lus10024428.g I 0.759
TRIUR3_01057 Triticum urartu TRIUR3_01057 N 0.759
GRMZM2G002805 Zea mays GRMZM2G002805 I 0.759
gene13959-v1.0-hybrid Fragaria vesca gene13959-v1.0-hybrid I 0.759
Sb01g031920 Sorghum bicolor Sb01g031920 N 0.757
BGIOSGA010468 Oryza indica BGIOSGA010468 I 0.757
ORGLA03G0210300 Oryza glaberrima ORGLA03G0210300 I 0.757
OLONG_027628 Oryza longistaminata OLONG_027628 I 0.757
OGLUM03G23350 Oryza glumaepatula OGLUM03G23350 I 0.757
ORUFI03G23240 Oryza rufipogon ORUFI03G23240 I 0.757
OB03G31780 Oryza brachyantha OB03G31780 I 0.757
OBART03G22570 Oryza barthii OBART03G22570 I 0.757
OS03G0437200 Oryza sativa OS03G0437200 I 0.757
ONIVA01G41600 Oryza nivara ONIVA01G41600 I 0.756
fgenesh2_kg.4__1796__AT2G37430.1 Arabidopsis lyrata fgenesh2_kg.4__1796__AT2G37430.1 I 0.756
GRMZM5G804618 Zea mays GRMZM5G804618 I 0.756
OGLUM01G40470 Oryza glumaepatula OGLUM01G40470 I 0.756
TRAES3BF117500110CFD_g Triticum aestivum TRAES3BF117500110CFD_g I 0.756
Thhalv10017303m.g Eutrema salsugineum Thhalv10017303m.g I 0.756
AC206217.2_FG006 Zea mays AC206217.2_FG006 I 0.756
Pavir.J32634 Panicum virgatum Pavir.J32634 I 0.756
BGIOSGA000523 Oryza indica BGIOSGA000523 I 0.756
F775_52353 Aegilops tauschii F775_52353 I 0.756
Bra039806 Brassica rapa Bra039806 I 0.756
Sb09g022660 Sorghum bicolor Sb09g022660 I 0.756
AC205250.3_FG004 Zea mays AC205250.3_FG004 I 0.756
Bostr.23794s0343 Boechera stricta Bostr.23794s0343 I 0.756
Gorai.006G176100 Gossypium raimondii Gorai.006G176100 I 0.756
Eucgr.B02394 Eucalyptus grandis Eucgr.B02394 I 0.756
LPERR01G31460 Leersia perrieri LPERR01G31460 I 0.756
ORUFI01G40000 Oryza rufipogon ORUFI01G40000 I 0.756
OMERI01G33680 Oryza meridionalis OMERI01G33680 I 0.756
ORGLA01G0304300 Oryza glaberrima ORGLA01G0304300 I 0.756
Bra030981 Brassica rapa Bra030981 I 0.756
Pavir.Ea03334 Panicum virgatum Pavir.Ea03334 I 0.756
OPUNC03G12210 Oryza punctata OPUNC03G12210 I 0.756
OS01G0838600 Oryza sativa OS01G0838600 I 0.756