Sb07g022700 (Sorghum bicolor)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Sb07g022700 T128248_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SGR5
M06805_2.00
Arabidopsis thaliana
WTTTTGTCTTWTHYD

HRDAWAAGACAAAAW
Dap-seq
OMalley et al.(2016)
SGR5_col_a
0.759 0.864
SGR5
M06806_2.00
Arabidopsis thaliana
WTTTGTCTYWWHBNN

NNVDWWRAGACAAAW
Dap-seq
OMalley et al.(2016)
SGR5_colamp_a
0.759 0.864
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb07g022700.1 C2H2 ZF 147 174
Sb07g022700.1 C2H2 ZF 168 194

Links

Other C2H2 ZF family TFs
Other Sorghum bicolor TFs

96 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aqu1.216869 Amphimedon queenslandica Aqu1.216869 I 0.000
CBN00477 Caenorhabditis brenneri CBN00477 I 0.000
CBN16859 Caenorhabditis brenneri CBN16859 I 0.000
SMAR011013 Strigamia maritima SMAR011013 I 0.000
egl-44 Caenorhabditis elegans WBGene00001208 I 0.000
Aan_R003816 Calypte anna Aan_R003816 I 0.000
ALUE_0001723701 Ascaris lumbricoides ALUE_0001723701 I 0.000
EVEC_0001129301 Enterobius vermicularis EVEC_0001129301 N 0.000
HPBE_0001619901 Heligmosomoides bakeri HPBE_0001619901 N 0.000
L892_g28430 Steinernema scapterisci L892_g28430 N 0.000
MhA1_Contig1858.frz3.gene4 Meloidogyne hapla MhA1_Contig1858.frz3.gene4 N 0.000
OESDEN_16528 Oesophagostomum dentatum OESDEN_16528 N 0.000
EEL_0001066501 Elaeophora elaphi EEL_0001066501 N 0.000
DICVIV_02426 Dictyocaulus viviparus DICVIV_02426 N 0.000
CGOC_0001182201 Cylicostephanus goldi CGOC_0001182201 N 0.000
BTMF_0001641801 Brugia timori BTMF_0001641801 N 0.000
ANCDUO_25554 Ancylostoma duodenale ANCDUO_25554 N 0.000
ANCCEY_01108 Ancylostoma ceylanicum ANCCEY_01108 N 0.000
ANCCAN_07014 Ancylostoma caninum ANCCAN_07014 N 0.000
BGLB013792 Biomphalaria glabrata BGLB013792 N 0.000
SVUK_0001908701 Strongylus vulgaris SVUK_0001908701 N 0.000