Sb07g022700 (Sorghum bicolor)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Sb07g022700 T128248_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SGR5
M06805_2.00
Arabidopsis thaliana
WTTTTGTCTTWTHYD

HRDAWAAGACAAAAW
Dap-seq
OMalley et al.(2016)
SGR5_col_a
0.759 0.864
SGR5
M06806_2.00
Arabidopsis thaliana
WTTTGTCTYWWHBNN

NNVDWWRAGACAAAW
Dap-seq
OMalley et al.(2016)
SGR5_colamp_a
0.759 0.864
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb07g022700.1 C2H2 ZF 147 174
Sb07g022700.1 C2H2 ZF 168 194

Links

Other C2H2 ZF family TFs
Other Sorghum bicolor TFs

96 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_23096 Aegilops tauschii F775_23096 I 0.000
AMTR_s00006p00250310 Amborella trichopoda AMTR_s00006p00250310 I 0.000
AMTR_s00129p00124210 Amborella trichopoda AMTR_s00129p00124210 I 0.000
Aquca_020_00579 Aquilegia coerulea Aquca_020_00579 I 0.000
Aquca_035_00175 Aquilegia coerulea Aquca_035_00175 I 0.000
Aquca_002_00952 Aquilegia coerulea Aquca_002_00952 I 0.000
UNE10 Arabidopsis lyrata scaffold_604304.1 I 0.000
BIM2 Arabidopsis lyrata fgenesh2_kg.2__1159__AT1G69010.1 I 0.000
ALC Arabidopsis lyrata fgenesh2_kg.8__2705__AT5G67110.1 I 0.000
BIM1 Arabidopsis lyrata scaffold_600819.1 I 0.000
BIM2 Arabidopsis thaliana AT1G69010 D 0.000
ALC Arabidopsis thaliana AT5G67110 I 0.000
BIM1 Arabidopsis thaliana AT5G08130 D 0.000
UNE10 Arabidopsis thaliana AT4G00050 D 0.000
Bostr.13129s0152 Boechera stricta Bostr.13129s0152 I 0.000
Bostr.14547s0014 Boechera stricta Bostr.14547s0014 I 0.000
Bostr.10273s0468 Boechera stricta Bostr.10273s0468 I 0.000
Bostr.0568s0133 Boechera stricta Bostr.0568s0133 I 0.000
BRADI3G56340 Brachypodium distachyon BRADI3G56340 I 0.000
BRADI4G32967 Brachypodium distachyon BRADI4G32967 I 0.000
BRADI3G46200 Brachypodium distachyon BRADI3G46200 I 0.000
BRADI3G38970 Brachypodium distachyon BRADI3G38970 I 0.000
Bo6g108530 Brassica oleracea Bo6g108530 I 0.000
Bo2g062560 Brassica oleracea Bo2g062560 I 0.000
Bo2g161110 Brassica oleracea Bo2g161110 I 0.000
Bo3g004690 Brassica oleracea Bo3g004690 I 0.000
Bo3g042120 Brassica oleracea Bo3g042120 I 0.000
Bo5g020460 Brassica oleracea Bo5g020460 I 0.000
Bo3g054850 Brassica oleracea Bo3g054850 I 0.000
Bra009322 Brassica rapa Bra009322 I 0.000
Bra012133 Brassica rapa Bra012133 I 0.000
Bra029354 Brassica rapa Bra029354 I 0.000
Bra000560 Brassica rapa Bra000560 I 0.000
Bra004355 Brassica rapa Bra004355 I 0.000
Bra038332 Brassica rapa Bra038332 I 0.000
Bra037312 Brassica rapa Bra037312 I 0.000
Bra005969 Brassica rapa Bra005969 I 0.000
PK10562.1 Cannabis sativa PK10562.1 I 0.000
PK20816.1 Cannabis sativa PK20816.1 I 0.000
PK08539.1 Cannabis sativa PK08539.1 I 0.000
PK01364.1 Cannabis sativa PK01364.1 I 0.000
PK00238.1 Cannabis sativa PK00238.1 I 0.000
Cagra.1157s0023 Capsella grandiflora Cagra.1157s0023 I 0.000
Cagra.20893s0010 Capsella grandiflora Cagra.20893s0010 I 0.000
Cagra.1365s0019 Capsella grandiflora Cagra.1365s0019 I 0.000
Carubv10001567m.g Capsella rubella Carubv10001567m.g I 0.000
Carubv10020679m.g Capsella rubella Carubv10020679m.g I 0.000
Carubv10028570m.g Capsella rubella Carubv10028570m.g I 0.000
Carubv10000655m.g Capsella rubella Carubv10000655m.g I 0.000
evm.TU.supercontig_82.59 Carica papaya evm.TU.supercontig_82.59 I 0.000
evm.TU.supercontig_3.225 Carica papaya evm.TU.supercontig_3.225 I 0.000
evm.TU.supercontig_289.6 Carica papaya evm.TU.supercontig_289.6 I 0.000
evm.TU.supercontig_212.3 Carica papaya evm.TU.supercontig_212.3 I 0.000
Ca_22883 Cicer arietinum Ca_22883 I 0.000
Ca_22043 Cicer arietinum Ca_22043 I 0.000
Ca_19269 Cicer arietinum Ca_19269 I 0.000
Cla022382 Citrullus lanatus Cla022382 I 0.000
Cla018818 Citrullus lanatus Cla018818 I 0.000
Ciclev10008008m.g Citrus clementina Ciclev10008008m.g I 0.000
Ciclev10012135m.g Citrus clementina Ciclev10012135m.g I 0.000
Ciclev10019786m.g Citrus clementina Ciclev10019786m.g I 0.000
Ciclev10020053m.g Citrus clementina Ciclev10020053m.g I 0.000
Ciclev10020248m.g Citrus clementina Ciclev10020248m.g I 0.000
Ciclev10032020m.g Citrus clementina Ciclev10032020m.g I 0.000
orange1.1g010045m.g Citrus sinensis orange1.1g010045m.g I 0.000
orange1.1g038451m.g Citrus sinensis orange1.1g038451m.g I 0.000
orange1.1g038097m.g Citrus sinensis orange1.1g038097m.g I 0.000
orange1.1g019960m.g Citrus sinensis orange1.1g019960m.g I 0.000
orange1.1g019485m.g Citrus sinensis orange1.1g019485m.g I 0.000
orange1.1g012387m.g Citrus sinensis orange1.1g012387m.g I 0.000
Cucsa.113490 Cucumis sativus Cucsa.113490 I 0.000
Cucsa.174600 Cucumis sativus Cucsa.174600 I 0.000
Cucsa.198520 Cucumis sativus Cucsa.198520 I 0.000
Cucsa.328060 Cucumis sativus Cucsa.328060 I 0.000
Eucgr.D02499 Eucalyptus grandis Eucgr.D02499 I 0.000
Eucgr.I02069 Eucalyptus grandis Eucgr.I02069 I 0.000
Eucgr.B03113 Eucalyptus grandis Eucgr.B03113 I 0.000
Eucgr.B00645 Eucalyptus grandis Eucgr.B00645 I 0.000
Thhalv10018889m.g Eutrema salsugineum Thhalv10018889m.g I 0.000
Thhalv10004889m.g Eutrema salsugineum Thhalv10004889m.g I 0.000
Thhalv10028687m.g Eutrema salsugineum Thhalv10028687m.g I 0.000
Thhalv10027863m.g Eutrema salsugineum Thhalv10027863m.g I 0.000
Thhalv10013181m.g Eutrema salsugineum Thhalv10013181m.g I 0.000
gene26139-v1.0-hybrid Fragaria vesca gene26139-v1.0-hybrid I 0.000
gene04534-v1.0-hybrid Fragaria vesca gene04534-v1.0-hybrid I 0.000
gene09125-v1.0-hybrid Fragaria vesca gene09125-v1.0-hybrid I 0.000
gene25546-v1.0-hybrid Fragaria vesca gene25546-v1.0-hybrid I 0.000
GLYMA01G15930 Glycine max GLYMA01G15930 I 0.000
GLYMA18G51080 Glycine max GLYMA18G51080 I 0.000
GLYMA17G08980 Glycine max GLYMA17G08980 I 0.000
GLYMA08G28010 Glycine max GLYMA08G28010 I 0.000
GLYMA05G07490 Glycine max GLYMA05G07490 I 0.000
GLYMA02G13670 Glycine max GLYMA02G13670 I 0.000
GLYMA01G32890 Glycine max GLYMA01G32890 I 0.000
GLYMA11G17120 Glycine max GLYMA11G17120 I 0.000
GLYMA03G04000 Glycine max GLYMA03G04000 I 0.000
GLYMA01G09010 Glycine max GLYMA01G09010 I 0.000
Gorai.008G106900 Gossypium raimondii Gorai.008G106900 I 0.000
Gorai.001G148300 Gossypium raimondii Gorai.001G148300 I 0.000
Gorai.006G269200 Gossypium raimondii Gorai.006G269200 I 0.000
Gorai.007G040600 Gossypium raimondii Gorai.007G040600 I 0.000
Gorai.001G197500 Gossypium raimondii Gorai.001G197500 I 0.000
Gorai.007G088300 Gossypium raimondii Gorai.007G088300 I 0.000
Gorai.013G098000 Gossypium raimondii Gorai.013G098000 I 0.000
Gorai.009G327300 Gossypium raimondii Gorai.009G327300 I 0.000
Gorai.007G118100 Gossypium raimondii Gorai.007G118100 I 0.000
Gorai.009G038500 Gossypium raimondii Gorai.009G038500 I 0.000
MLOC_62335 Hordeum vulgare MLOC_62335 I 0.000
LPERR06G03910 Leersia perrieri LPERR06G03910 I 0.000
LPERR08G15680 Leersia perrieri LPERR08G15680 I 0.000
LPERR06G05570 Leersia perrieri LPERR06G05570 I 0.000
LPERR09G10080 Leersia perrieri LPERR09G10080 I 0.000
Lus10034358.g Linum usitatissimum Lus10034358.g I 0.000
Lus10004630.g Linum usitatissimum Lus10004630.g I 0.000
Lus10007974.g Linum usitatissimum Lus10007974.g I 0.000
Lus10013502.g Linum usitatissimum Lus10013502.g I 0.000
Lus10026684.g Linum usitatissimum Lus10026684.g I 0.000
MDP0000261293 Malus domestica MDP0000261293 I 0.000
MDP0000439540 Malus domestica MDP0000439540 I 0.000
cassava13956.valid.m1 Manihot esculenta cassava13956.valid.m1 I 0.000
cassava15.valid.m1 Manihot esculenta cassava15.valid.m1 I 0.000
cassava29314.valid.m1 Manihot esculenta cassava29314.valid.m1 I 0.000
cassava29318.valid.m1 Manihot esculenta cassava29318.valid.m1 I 0.000
cassava43370.valid.m1 Manihot esculenta cassava43370.valid.m1 I 0.000
cassava19894.m1 Manihot esculenta cassava19894.m1 I 0.000
cassava14.valid.m1 Manihot esculenta cassava14.valid.m1 I 0.000
cassava10497.m1 Manihot esculenta cassava10497.m1 I 0.000
cassava43379.valid.m1 Manihot esculenta cassava43379.valid.m1 I 0.000
MTR_5g048350 Medicago truncatula MTR_5g048350 I 0.000
MTR_1g019240 Medicago truncatula MTR_1g019240 I 0.000
MTR_4g110040 Medicago truncatula MTR_4g110040 I 0.000
MTR_7g017320 Medicago truncatula MTR_7g017320 I 0.000
mgf013208m Mimulus guttatus mgf013208m I 0.000
mgf011829m Mimulus guttatus mgf011829m I 0.000
mgf001137m Mimulus guttatus mgf001137m I 0.000
mgf005431m Mimulus guttatus mgf005431m I 0.000
mgf005849m Mimulus guttatus mgf005849m I 0.000
GSMUA_Achr9G28050_001 Musa acuminata GSMUA_Achr9G28050_001 I 0.000
GSMUA_Achr2G05450_001 Musa acuminata GSMUA_Achr2G05450_001 I 0.000
GSMUA_Achr3G10640_001 Musa acuminata GSMUA_Achr3G10640_001 I 0.000
GSMUA_Achr9G19110_001 Musa acuminata GSMUA_Achr9G19110_001 I 0.000
GSMUA_Achr4G19530_001 Musa acuminata GSMUA_Achr4G19530_001 I 0.000
OBART09G13850 Oryza barthii OBART09G13850 I 0.000
OBART06G06000 Oryza barthii OBART06G06000 I 0.000
OBART06G04330 Oryza barthii OBART06G04330 I 0.000
OBART02G20940 Oryza barthii OBART02G20940 I 0.000
OB08G25940 Oryza brachyantha OB08G25940 I 0.000
OB02G28530 Oryza brachyantha OB02G28530 I 0.000
OB02G38020 Oryza brachyantha OB02G38020 I 0.000
ORGLA06G0286200 Oryza glaberrima ORGLA06G0286200 I 0.000
ORGLA06G0039900 Oryza glaberrima ORGLA06G0039900 I 0.000
ORGLA02G0264700 Oryza glaberrima ORGLA02G0264700 I 0.000
ORGLA09G0105800 Oryza glaberrima ORGLA09G0105800 I 0.000
ORGLA02G0180000 Oryza glaberrima ORGLA02G0180000 I 0.000
ORGLA08G0164200 Oryza glaberrima ORGLA08G0164200 I 0.000
OGLUM09G14430 Oryza glumaepatula OGLUM09G14430 I 0.000
OGLUM02G21200 Oryza glumaepatula OGLUM02G21200 I 0.000
OGLUM06G04430 Oryza glumaepatula OGLUM06G04430 I 0.000
OGLUM08G19830 Oryza glumaepatula OGLUM08G19830 I 0.000
OGLUM06G06280 Oryza glumaepatula OGLUM06G06280 I 0.000
BGIOSGA030958 Oryza indica BGIOSGA030958 I 0.000
BGIOSGA022375 Oryza indica BGIOSGA022375 I 0.000
BGIOSGA021743 Oryza indica BGIOSGA021743 I 0.000
BGIOSGA006236 Oryza indica BGIOSGA006236 I 0.000
BGIOSGA005697 Oryza indica BGIOSGA005697 I 0.000
BGIOSGA028888 Oryza indica BGIOSGA028888 I 0.000
OLONG_020060 Oryza longistaminata OLONG_020060 I 0.000
OLONG_003583 Oryza longistaminata OLONG_003583 I 0.000
OLONG_013313 Oryza longistaminata OLONG_013313 I 0.000
OLONG_025501 Oryza longistaminata OLONG_025501 I 0.000
OMERI06G05430 Oryza meridionalis OMERI06G05430 I 0.000
OMERI09G10560 Oryza meridionalis OMERI09G10560 I 0.000
OMERI06G07190 Oryza meridionalis OMERI06G07190 I 0.000
OMERI02G20700 Oryza meridionalis OMERI02G20700 I 0.000
ONIVA06G05510 Oryza nivara ONIVA06G05510 I 0.000
ONIVA09G14370 Oryza nivara ONIVA09G14370 I 0.000
ONIVA08G20800 Oryza nivara ONIVA08G20800 I 0.000
ONIVA06G06960 Oryza nivara ONIVA06G06960 I 0.000
ONIVA02G23040 Oryza nivara ONIVA02G23040 I 0.000
OPUNC09G12310 Oryza punctata OPUNC09G12310 I 0.000
OPUNC02G18940 Oryza punctata OPUNC02G18940 I 0.000
OPUNC06G05770 Oryza punctata OPUNC06G05770 I 0.000
OPUNC08G16820 Oryza punctata OPUNC08G16820 I 0.000
ORUFI02G21960 Oryza rufipogon ORUFI02G21960 I 0.000
ORUFI06G04330 Oryza rufipogon ORUFI06G04330 I 0.000
ORUFI06G06220 Oryza rufipogon ORUFI06G06220 I 0.000
ORUFI08G21030 Oryza rufipogon ORUFI08G21030 I 0.000
ORUFI09G14830 Oryza rufipogon ORUFI09G14830 I 0.000
OS06G0193400 Oryza sativa OS06G0193400 I 0.000
OS09G0475400 Oryza sativa OS09G0475400 I 0.000
OS02G0726700 Oryza sativa OS02G0726700 I 0.000
OS08G0490000 Oryza sativa OS08G0490000 I 0.000
OS02G0564700 Oryza sativa OS02G0564700 I 0.000
Pavir.J15575 Panicum virgatum Pavir.J15575 I 0.000
Pavir.Aa00700 Panicum virgatum Pavir.Aa00700 I 0.000
Pavir.J38250 Panicum virgatum Pavir.J38250 I 0.000
Pavir.J15280 Panicum virgatum Pavir.J15280 I 0.000
Pavir.J04606 Panicum virgatum Pavir.J04606 I 0.000
Pavir.Db01966 Panicum virgatum Pavir.Db01966 I 0.000
Pavir.Ab02747 Panicum virgatum Pavir.Ab02747 I 0.000
Pavir.Aa01634 Panicum virgatum Pavir.Aa01634 I 0.000
Pavir.J38910 Panicum virgatum Pavir.J38910 I 0.000
Pavir.Fb01833 Panicum virgatum Pavir.Fb01833 I 0.000
Pavir.Ab03017 Panicum virgatum Pavir.Ab03017 I 0.000
gw1.90.123.1 Physcomitrella patens gw1.90.123.1 I 0.000
estExt_fgenesh1_pg.C_2110039 Physcomitrella patens estExt_fgenesh1_pg.C_2110039 I 0.000
e_gw1.167.42.1 Physcomitrella patens e_gw1.167.42.1 I 0.000
fgenesh1_pg.scaffold_37000071 Physcomitrella patens fgenesh1_pg.scaffold_37000071 D 0.000
POPTR_0004s11180 Populus trichocarpa POPTR_0004s11180 I 0.000
POPTR_0012s06650 Populus trichocarpa POPTR_0012s06650 I 0.000
POPTR_0008s11120 Populus trichocarpa POPTR_0008s11120 I 0.000
POPTR_0010s14740 Populus trichocarpa POPTR_0010s14740 I 0.000
POPTR_0017s13610 Populus trichocarpa POPTR_0017s13610 I 0.000
POPTR_0015s03550 Populus trichocarpa POPTR_0015s03550 I 0.000
POPTR_0002s14430 Populus trichocarpa POPTR_0002s14430 I 0.000
POPTR_0006s13790 Populus trichocarpa POPTR_0006s13790 I 0.000
PRUPE_ppa008387mg Prunus persica PRUPE_ppa008387mg I 0.000
PRUPE_ppa005629mg Prunus persica PRUPE_ppa005629mg I 0.000
PRUPE_ppa008856mg Prunus persica PRUPE_ppa008856mg I 0.000
PRUPE_ppa003436mg Prunus persica PRUPE_ppa003436mg I 0.000
29739.m003684 Ricinus communis 29739.m003684 I 0.000
30138.m003913 Ricinus communis 30138.m003913 I 0.000
30138.m003899 Ricinus communis 30138.m003899 I 0.000
29790.m000843 Ricinus communis 29790.m000843 I 0.000
30174.m008814 Ricinus communis 30174.m008814 I 0.000
SapurV1A.0084s0570 Salix purpurea SapurV1A.0084s0570 I 0.000
SapurV1A.0060s0510 Salix purpurea SapurV1A.0060s0510 I 0.000
SapurV1A.0178s0150 Salix purpurea SapurV1A.0178s0150 I 0.000
SapurV1A.0249s0140 Salix purpurea SapurV1A.0249s0140 I 0.000
SapurV1A.0321s0050 Salix purpurea SapurV1A.0321s0050 I 0.000
SapurV1A.0274s0040 Salix purpurea SapurV1A.0274s0040 I 0.000
SapurV1A.0868s0010 Salix purpurea SapurV1A.0868s0010 I 0.000
SapurV1A.2517s0020 Salix purpurea SapurV1A.2517s0020 I 0.000
SapurV1A.0033s0400 Salix purpurea SapurV1A.0033s0400 I 0.000
SELMODRAFT_451477 Selaginella moellendorffii SELMODRAFT_451477 I 0.000
SELMODRAFT_425336 Selaginella moellendorffii SELMODRAFT_425336 I 0.000
SELMODRAFT_451475 Selaginella moellendorffii SELMODRAFT_451475 I 0.000
Si016939m.g Setaria italica Si016939m.g I 0.000
Si006332m.g Setaria italica Si006332m.g I 0.000
Si013622m.g Setaria italica Si013622m.g I 0.000
Si016505m.g Setaria italica Si016505m.g I 0.000
Si029604m.g Setaria italica Si029604m.g I 0.000
Solyc01g090790.2 Solanum lycopersicum Solyc01g090790.2 I 0.000
Solyc03g114720.2 Solanum lycopersicum Solyc03g114720.2 I 0.000
Solyc04g005280.2 Solanum lycopersicum Solyc04g005280.2 I 0.000
Solyc05g011810.2 Solanum lycopersicum Solyc05g011810.2 I 0.000
Solyc06g069370.2 Solanum lycopersicum Solyc06g069370.2 I 0.000
PGSC0003DMG400001919 Solanum tuberosum PGSC0003DMG400001919 I 0.000
PGSC0003DMG400019654 Solanum tuberosum PGSC0003DMG400019654 I 0.000
PGSC0003DMG400025976 Solanum tuberosum PGSC0003DMG400025976 I 0.000
PGSC0003DMG401007955 Solanum tuberosum PGSC0003DMG401007955 I 0.000
Sb02g027460 Sorghum bicolor Sb02g027460 I 0.000
Sb10g006250 Sorghum bicolor Sb10g006250 I 0.000
Sb04g023320 Sorghum bicolor Sb04g023320 I 0.000
Sb04g029270 Sorghum bicolor Sb04g029270 I 0.000
Sb07g028860 Sorghum bicolor Sb07g028860 I 0.000
Sb10g004500 Sorghum bicolor Sb10g004500 I 0.000
TCM_019015 Theobroma cacao TCM_019015 I 0.000
TCM_037455 Theobroma cacao TCM_037455 I 0.000
TCM_011433 Theobroma cacao TCM_011433 I 0.000
TCM_014392 Theobroma cacao TCM_014392 I 0.000
TCM_005607 Theobroma cacao TCM_005607 I 0.000
TCM_004959 Theobroma cacao TCM_004959 I 0.000
Traes_6BL_DA93728B3 Triticum aestivum Traes_6BL_DA93728B3 I 0.000
Traes_6DL_D38F3257B Triticum aestivum Traes_6DL_D38F3257B I 0.000
Traes_5DL_E96693018 Triticum aestivum Traes_5DL_E96693018 I 0.000
Traes_5BL_AAC9C7238 Triticum aestivum Traes_5BL_AAC9C7238 I 0.000
Traes_5AL_0D4BDDDCD Triticum aestivum Traes_5AL_0D4BDDDCD I 0.000
VIT_11s0016g00380 Vitis vinifera VIT_11s0016g00380 I 0.000
BIM1 Vitis vinifera VIT_17s0000g04790 I 0.000
UNE10 Vitis vinifera VIT_15s0021g02690 I 0.000
BIM2 Vitis vinifera VIT_01s0010g00540 I 0.000
BIM3 Vitis vinifera VIT_14s0083g00930 I 0.000
GRMZM2G089501 Zea mays GRMZM2G089501 I 0.000
GRMZM2G116785 Zea mays GRMZM2G116785 I 0.000
GRMZM2G017349 Zea mays GRMZM2G017349 I 0.000
GRMZM2G317450 Zea mays GRMZM2G317450 I 0.000
GRMZM5G839518 Zea mays GRMZM5G839518 I 0.000
GRMZM2G009478 Zea mays GRMZM2G009478 I 0.000
GRMZM2G024530 Zea mays GRMZM2G024530 I 0.000