TF Information

scaffold_501386.1 *(Arabidopsis lyrata)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00096 (zf-C2H2)	IPR007087	scaffold_501386.1	T128311_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
IDD1 M06824_2.00	Arabidopsis thaliana	DNTTTTGTCKTTTWBYD	HRVWAAAMGACAAAANH	Dap-seq OMalley et al.(2016) At5g66730_colamp_a	0.763	0.930
IDD1 M06825_2.00	Arabidopsis thaliana	WDTTTTGTCKTTTWNYD	HRNWAAAMGACAAAAHW	Dap-seq OMalley et al.(2016) At5g66730_col	0.763	0.930
JKD M06818_2.00	Arabidopsis thaliana	HHNWWTTTTGTCKTTTWBYD	HRVWAAAMGACAAAAWWNDD	Dap-seq OMalley et al.(2016) JKD_col_a	0.759	0.884
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
scaffold_501386.1	C2H2 ZF	145	166	WKCDKCSKKYAVMSDWKAHSKI
scaffold_501386.1	C2H2 ZF	165	191	KICGTREYRCDCGTLFSRKDSFITHRA

Links
Other C2H2 ZF family TFs
Other *Arabidopsis lyrata* TFs

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281 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action