CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SEPMUDRAFT_52418
(
Sphaerulina musiva
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
SEPMUDRAFT_52418
T128547_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HCBG_00900
M01178_2.00
Histoplasma capsulatum
VWTCCYNNNN
NNNNRGGAWB
PBM
Lambert et al.(2019)
pTH11146
0.787
0.860
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMF08804
C2H2 ZF
204
227
QCWEHGCNGRQFSTFSNLLRHQRE
EMF08804
C2H2 ZF
235
256
SYCPKCGAEFTRTTARNGHLAH
Links
Other
C2H2 ZF
family TFs
Other
Sphaerulina musiva
TFs
76 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy