CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si017660m.g
(
Setaria italica
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
Si017660m.g
T128671_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si017660m
C2H2 ZF
63
87
FLCSYEGCGKTFFDAGALRKHAHVH
Si017660m
C2H2 ZF
92
116
YICHYDNCGKKFLDSSKLKRHFLIH
Si017660m
C2H2 ZF
122
146
FVCPHEGCGKAFSLDFNLKAHMKTH
Si017660m
C2H2 ZF
152
177
HVCQYPECGRRFTQESKLRAHIRSQH
Links
Other
C2H2 ZF
family TFs
Other
Setaria italica
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ab01903
Panicum virgatum
Pavir.Ab01903
N
0.822
Pavir.Aa01761
Panicum virgatum
Pavir.Aa01761
N
0.822
Sb04g022470
Sorghum bicolor
Sb04g022470
N
0.822
GRMZM5G885700
Zea mays
GRMZM5G885700
N
0.822
F775_26881
Aegilops tauschii
F775_26881
N
0.793