CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si036003m.g
(
Setaria italica
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
Si036003m.g
T128705_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
id1
M02672_2.00
Zea mays
TBKYYBYTHBYG
CRVDARVRRMVA
SELEX
Mathelier et al.(2014)
MA0120.1
0.803
0.951
id1
M10380_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ID1_01
0.803
0.951
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si036003m
C2H2 ZF
151
172
WRCERCGKRYAVQSDWKAHVKG
Si036003m
C2H2 ZF
173
197
CGTREYRCDCGILFTRKDSLLTHRA
Links
Other
C2H2 ZF
family TFs
Other
Setaria italica
TFs
53 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy