SINV13240 (Solenopsis invicta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 SINV13240 T128787_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ttk
M05863_2.00
Drosophila melanogaster
DTRTCCTKDN

NHMAGGAYAH
SMiLE-seq
Isakova et al.(2017)
Ttk
0.794 0.913
ttk
M06469_2.00
Drosophila melanogaster
RTTATCCTK

MAGGATAAY
B1H
Mathelier et al.(2014)
MA0460.1
0.794 0.913
ttk
M06074_2.00
Drosophila melanogaster
RSMAGGAYMTYB

VRAKRTCCTKSY
B1H
Zhu et al.(2011)
ttk_FlyReg_FBgn0003870
0.794 0.913
ttk
M06075_2.00
Drosophila melanogaster
RTTATCCTK

MAGGATAAY
B1H
Zhu et al.(2011)
ttk_NAR_FBgn0003870
0.794 0.913
ttk
M06076_2.00
Drosophila melanogaster
CHHCCCYTA

TARGGGDDG
B1H
Zhu et al.(2011)
ttk-PA_SANGER_5_FBgn0003870
0.794 0.913
ttk
M06077_2.00
Drosophila melanogaster
TRTCCTK

MAGGAYA
B1H
Zhu et al.(2011)
ttk-PF_SANGER_5_FBgn0003870
0.794 0.913
ttk
M09665_2.00
Drosophila melanogaster
RWKRTCCTKB

VMAGGAYMWY
Misc
Kulakovskiy et al.(2009)
ttk
0.794 0.913
ttk
M10378_2.00
Drosophila melanogaster
SCAGGASC

GSTCCTGS
Transfac
Matys et al.(2006)
I$TTK69_01
0.794 0.913
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SINV13240-PA C2H2 ZF 126 154
SINV13240-PA C2H2 ZF 162 185

Links

Other C2H2 ZF family TFs
Other Solenopsis invicta TFs

Invalid Input OrderBy

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action