CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SINV14822
(
Solenopsis invicta
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
SINV14822
T128807_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Kah
M03690_2.00
Drosophila melanogaster
NVCCACCTGTTN
NAACAGGTGGBN
SELEX
Nitta et al.(2015)
CG17181_1
0.773
0.867
Kah
M06137_2.00
Drosophila melanogaster
VCCACCTGT
ACAGGTGGB
B1H
Zhu et al.(2011)
CG17181_SANGER_5_FBgn0035144
0.773
0.867
Kah
M06138_2.00
Drosophila melanogaster
NVCCACCTGYHVVNN
NNBBDRCAGGTGGBN
B1H
Zhu et al.(2011)
CG17181_SOLEXA_5_FBgn0035144
0.773
0.867
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SINV14822-PA
C2H2 ZF
312
334
HECPDCGKKYSTSSNLARHRQTH
SINV14822-PA
C2H2 ZF
344
365
RCPHCDKVYVSMPAFSMHVRTH
SINV14822-PA
C2H2 ZF
369
391
CKCHYCGKCFSRPWLLQGHIRTH
SINV14822-PA
C2H2 ZF
397
419
FKCTICNKAFADKSNLRAHIQTH
SINV14822-PA
C2H2 ZF
425
446
HVCGRCGKAFALKSYLYKHEES
Links
Other
C2H2 ZF
family TFs
Other
Solenopsis invicta
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy