SINV16941 (Solenopsis invicta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 SINV16941 T128825_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GLIS1
M02911_2.00
Homo sapiens
MGACCCCCCACGWHGN

NCDWCGTGGGGGGTCK
SELEX
Jolma et al.(2013)
GLIS1_1
0.793 0.868
GLIS1
M04564_2.00
Homo sapiens
BMCCCCCCRCVDHSH

DSDHBGYGGGGGGKV
SELEX
Yin et al.(2017)
GLIS1_eDBD_HT-SELEX
0.793 0.868
GLIS1
M08345_2.00
Homo sapiens
SNSYSYRGGRGGBV

BVCCYCCYRSRSNS
ChIP-seq
Schmitges et al.(2016)
Q8NBF1.MEME
0.793 0.868
GLIS1
M04565_2.00
Homo sapiens
DCWHNGTGGGGGGTV

BACCCCCCACNDWGH
SELEX
Yin et al.(2017)
GLIS1_eDBD_Methyl-HT-SELEX
0.793 0.868
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SINV16941-PA C2H2 ZF 935 961
SINV16941-PA C2H2 ZF 968 991
SINV16941-PA C2H2 ZF 997 1021
SINV16941-PA C2H2 ZF 1027 1051

Links

Other C2H2 ZF family TFs
Other Solenopsis invicta TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SPRG_01851 Saprolegnia parasitica SPRG_01851 N 0.000
maker-pve_contig_244-fgenesh-gene-0.3 Pythium vexans maker-pve_contig_244-fgenesh-gene-0.3 N 0.000
maker-pve_contig_244-fgenesh-gene-0.5 Pythium vexans maker-pve_contig_244-fgenesh-gene-0.5 N 0.000
Phyra75932 Phytophthora ramorum Phyra75932 N 0.000
Phyra75938 Phytophthora ramorum Phyra75938 N 0.000
Physo132525 Phytophthora sojae Physo132525 N 0.000
PITG_05742 Phytophthora infestans PITG_05742 N 0.000
PYU1_G004965 Pythium ultimum PYU1_G004965 N 0.000
PYU1_G005004 Pythium ultimum PYU1_G005004 N 0.000
snap-piw_contig_1471-abinit-gene-0.10 Pythium iwayamai snap-piw_contig_1471-abinit-gene-0.10 N 0.000
estExt_fgenesh1_kg.C_00378 Phytophthora capsici estExt_fgenesh1_kg.C_00378 N 0.000
maker-piw_contig_1009-fgenesh-gene-0.1 Pythium iwayamai maker-piw_contig_1009-fgenesh-gene-0.1 N 0.000
maker-pir_contig_962-fgenesh-gene-0.0 Pythium irregulare maker-pir_contig_962-fgenesh-gene-0.0 N 0.000
maker-pir_contig_677-snap-gene-0.4 Pythium irregulare maker-pir_contig_677-snap-gene-0.4 N 0.000
F443_00235 Phytophthora parasitica F443_00235 N 0.000
F443_02170 Phytophthora parasitica F443_02170 N 0.000
fgenesh_scip_prom.28083.7634 Phytophthora lateralis fgenesh_scip_prom.28083.7634 N 0.000
fgenesh_scip_prom.28083.8513 Phytophthora lateralis fgenesh_scip_prom.28083.8513 N 0.000
fgenesh_scip_prom.46568.2990 Phytophthora kernoviae fgenesh_scip_prom.46568.2990 N 0.000
fgenesh_scip_prom.46568.2994 Phytophthora kernoviae fgenesh_scip_prom.46568.2994 N 0.000
HpaG800546 Hyaloperonospora arabidopsidis HpaG800546 N 0.000
maker-pag1_scaffold_241-snap-gene-0.5 Pythium aphanidermatum maker-pag1_scaffold_241-snap-gene-0.5 N 0.000
maker-pag1_scaffold_241-snap-gene-0.8 Pythium aphanidermatum maker-pag1_scaffold_241-snap-gene-0.8 N 0.000
maker-par_contig_498-fgenesh-gene-0.0 Pythium arrhenomanes maker-par_contig_498-fgenesh-gene-0.0 N 0.000
estExt_fgenesh1_pg.C_00107 Phytophthora capsici estExt_fgenesh1_pg.C_00107 N 0.000