SINV16941 (Solenopsis invicta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 SINV16941 T128825_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GLIS1
M02911_2.00
Homo sapiens
MGACCCCCCACGWHGN

NCDWCGTGGGGGGTCK
SELEX
Jolma et al.(2013)
GLIS1_1
0.793 0.868
GLIS1
M04564_2.00
Homo sapiens
BMCCCCCCRCVDHSH

DSDHBGYGGGGGGKV
SELEX
Yin et al.(2017)
GLIS1_eDBD_HT-SELEX
0.793 0.868
GLIS1
M08345_2.00
Homo sapiens
SNSYSYRGGRGGBV

BVCCYCCYRSRSNS
ChIP-seq
Schmitges et al.(2016)
Q8NBF1.MEME
0.793 0.868
GLIS1
M04565_2.00
Homo sapiens
DCWHNGTGGGGGGTV

BACCCCCCACNDWGH
SELEX
Yin et al.(2017)
GLIS1_eDBD_Methyl-HT-SELEX
0.793 0.868
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SINV16941-PA C2H2 ZF 935 961
SINV16941-PA C2H2 ZF 968 991
SINV16941-PA C2H2 ZF 997 1021
SINV16941-PA C2H2 ZF 1027 1051

Links

Other C2H2 ZF family TFs
Other Solenopsis invicta TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
NFIA_113430 Neosartorya fischeri CADNFIAG00010400 N 0.000