SJAG_03473 (Schizosaccharomyces japonicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 SJAG_03473 T128939_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
cre-1
M01198_2.00
Neurospora crassa
CCCCRNNN

NNNYGGGG
PBM
Lambert et al.(2019)
pTH8711
0.798 0.848
RO3G_16591
M01442_2.00
Rhizopus oryzae
NCCCCRCDNN

NNHGYGGGGN
PBM
Najafabadi et al.(2015a)
pTH10231
0.797 0.870
MIG1
M00026_2.00
Saccharomyces cerevisiae
HCCCCRCN

NGYGGGGD
PBM
Badis et al.(2008)
MIG1_2106
0.758 0.739
MIG1
M01532_2.00
Saccharomyces cerevisiae
NCYCCRBNNN

NNNVYGGRGN
PBM
Zhu et al.(2009)
Mig1
0.758 0.739
MIG1
M07456_2.00
Saccharomyces cerevisiae
NCCCCRS

SYGGGGN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0337.1
0.758 0.739
MIG1
M08523_2.00
Saccharomyces cerevisiae
NCCCCRS

SYGGGGN
Misc
DeBoer et al.(2011)
YGL035C_555
0.758 0.739
MIG1
M08524_2.00
Saccharomyces cerevisiae
CCCCRSWWWW

WWWWSYGGGG
Misc
DeBoer et al.(2011)
YGL035C_654
0.758 0.739
MIG1
M10391_2.00
Saccharomyces cerevisiae
NHCCCCRSDTWWWWDDM

KHHWWWWAHSYGGGGDN
Transfac
Matys et al.(2006)
F$MIG1_01
0.758 0.739
MIG1
M10392_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MIG1_03
0.758 0.739
MIG1
M10393_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MIG1_Q6
0.758 0.739
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EEB08326 C2H2 ZF 22 44
EEB08326 C2H2 ZF 50 74

Links

Other C2H2 ZF family TFs
Other Schizosaccharomyces japonicus TFs

281 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00096p00076220 Amborella trichopoda AMTR_s00096p00076220 I 0.000
Aquca_045_00020 Aquilegia coerulea Aquca_045_00020 I 0.000
MYB64 Arabidopsis lyrata fgenesh2_kg.6__1071__AT5G11050.1 N 0.000
MYB64 Arabidopsis thaliana AT5G11050 N 0.000
Bostr.23997s0007 Boechera stricta Bostr.23997s0007 N 0.000
Bostr.20821s0001 Boechera stricta Bostr.20821s0001 N 0.000
Bo3g018490 Brassica oleracea Bo3g018490 I 0.000
Bo2g028290 Brassica oleracea Bo2g028290 I 0.000
Bra020346 Brassica rapa Bra020346 I 0.000
Bra006744 Brassica rapa Bra006744 I 0.000
evm.TU.supercontig_112.44 Carica papaya evm.TU.supercontig_112.44 N 0.000
Cla008304 Citrullus lanatus Cla008304 N 0.000
Ciclev10030254m.g Citrus clementina Ciclev10030254m.g N 0.000
orange1.1g046581m.g Citrus sinensis orange1.1g046581m.g N 0.000
Cucsa.146980 Cucumis sativus Cucsa.146980 N 0.000
Thhalv10015404m.g Eutrema salsugineum Thhalv10015404m.g N 0.000
Thhalv10027294m.g Eutrema salsugineum Thhalv10027294m.g N 0.000
gene08006-v1.0-hybrid Fragaria vesca gene08006-v1.0-hybrid I 0.000
gene32198-v1.0-hybrid Fragaria vesca gene32198-v1.0-hybrid I 0.000
GLYMA02G39070 Glycine max GLYMA02G39070 N 0.000
GLYMA05G02300 Glycine max GLYMA05G02300 I 0.000
GLYMA18G07360 Glycine max GLYMA18G07360 N 0.000
Gorai.011G044100 Gossypium raimondii Gorai.011G044100 N 0.000
Gorai.001G115300 Gossypium raimondii Gorai.001G115300 N 0.000
Lus10018220.g Linum usitatissimum Lus10018220.g N 0.000
Lus10005864.g Linum usitatissimum Lus10005864.g I 0.000
Lus10040684.g Linum usitatissimum Lus10040684.g N 0.000
chr4.CM0042.120.nd Lotus japonicus chr4.CM0042.120.nd N 0.000
MDP0000319656 Malus domestica MDP0000319656 I 0.000
cassava26674.m1 Manihot esculenta cassava26674.m1 N 0.000
cassava9008.m1 Manihot esculenta cassava9008.m1 I 0.000
cassava26507.m1 Manihot esculenta cassava26507.m1 N 0.000
cassava19706.m1 Manihot esculenta cassava19706.m1 I 0.000
MTR_3g463400 Medicago truncatula MTR_3g463400 N 0.000
MTR_5g070020 Medicago truncatula MTR_5g070020 N 0.000
GSMUA_Achr10G00770_001 Musa acuminata GSMUA_Achr10G00770_001 N 0.000
PDK_20s1782461g001 Phoenix dactylifera PDK_20s1782461g001 N 0.000
POPTR_0012s08360 Populus trichocarpa POPTR_0012s08360 I 0.000
POPTR_0009s04870 Populus trichocarpa POPTR_0009s04870 N 0.000
POPTR_0001s25710 Populus trichocarpa POPTR_0001s25710 N 0.000
Pm024743 Prunus mume Pm024743 I 0.000
Pm000541 Prunus mume Pm000541 I 0.000
PRUPE_ppa018123mg Prunus persica PRUPE_ppa018123mg I 0.000
PRUPE_ppa026791mg Prunus persica PRUPE_ppa026791mg I 0.000
29681.m001315 Ricinus communis 29681.m001315 N 0.000
SapurV1A.0772s0150 Salix purpurea SapurV1A.0772s0150 N 0.000
Solyc06g076840.1 Solanum lycopersicum Solyc06g076840.1 N 0.000
PGSC0003DMG400044141 Solanum tuberosum PGSC0003DMG400044141 N 0.000
TCM_041651 Theobroma cacao TCM_041651 N 0.000
MYB98 Vitis vinifera VIT_17s0000g08550 I 0.000