CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SKUD_152903
(
Saccharomyces kudriavzevii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
SKUD_152903
T128950_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PZF1
M08548_2.00
Saccharomyces cerevisiae
TGTAGTGGGTGACC
GGTCACCCACTACA
Misc
DeBoer et al.(2011)
YPR186C_1321
0.805
0.935
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EJT41928
C2H2 ZF
49
74
FFCDYDGCDKAFTRPSILTEHQLSVH
EJT41928
C2H2 ZF
80
102
FQCDKCPKSFVKKSHLERHLYSH
EJT41928
C2H2 ZF
108
130
FQCSYCGKGVTTRQQLKRHEVTH
EJT41928
C2H2 ZF
134
159
FVCPEKGCDLRFYKHPQLRAHILSVH
EJT41928
C2H2 ZF
163
186
LACPHCNKSFQRPYRLQNHISKHH
EJT41928
C2H2 ZF
194
219
YQCTFAGCCKEFRIWSQLQSHIKNDH
EJT41928
C2H2 ZF
222
244
LKCPICNKPCVGENGLQMHMIIH
EJT41928
C2H2 ZF
253
277
WKCHICSDISFPRKHDLLTHYQSVH
Links
Other
C2H2 ZF
family TFs
Other
Saccharomyces kudriavzevii
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy