SKUD_202710 (Saccharomyces kudriavzevii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 SKUD_202710 T128959_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
STP3
M00034_2.00
Saccharomyces cerevisiae
NTAGCGBD

HVCGCTAN
PBM
Badis et al.(2008)
STP3_4483
0.827 1.000
STP3
M07464_2.00
Saccharomyces cerevisiae
DNTAGCGBN

NVCGCTANH
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0396.1
0.827 1.000
STP3
M08535_2.00
Saccharomyces cerevisiae
DNTAGCGBN

NVCGCTANH
Misc
DeBoer et al.(2011)
YLR375W_568
0.827 1.000
STP4
M00018_2.00
Saccharomyces cerevisiae
NNNKSTRDN

NHYASMNNN
PBM
Badis et al.(2008)
STP4_2135
0.788 0.913
STP4
M01526_2.00
Saccharomyces cerevisiae
TRCGGCKB

VMGCCGYA
PBM
Zhu et al.(2009)
Stp4
0.788 0.913
STP4
M07448_2.00
Saccharomyces cerevisiae
NGCGCTABH

DVTAGCGCN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0397.1
0.788 0.913
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJT44014 C2H2 ZF 170 192

Links

Other C2H2 ZF family TFs
Other Saccharomyces kudriavzevii TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
15460_YLR375W Saccharomyces paradoxus 15460_YLR375W I 0.827
15823_YLR375W Saccharomyces mikatae 15823_YLR375W I 0.827
16393_YLR375W Saccharomyces bayanus 16393_YLR375W I 0.827
SU7_2363 Saccharomyces arboricola SU7_2363 I 0.827
STP3 Saccharomyces cerevisiae YLR375W D 0.827
KLTH0D13618g Lachancea thermotolerans KLTH0D13618g I 0.815
KLTH0D13618g Kluyveromyces thermotolerans KLTH0D13618g I 0.815
NDAI_0D04510 Naumovozyma dairenensis NDAI_0D04510 I 0.788
NCAS_0J01300 Naumovozyma castellii NCAS_0J01300 I 0.788
3056_YDL048C Saccharomyces mikatae 3056_YDL048C I 0.788
NCAS_0A02360 Naumovozyma castellii NCAS_0A02360 I 0.788
Scas_Contig683.30 Saccharomyces castellii Scas_Contig683.30 I 0.788
ZYRO0B07436g Zygosaccharomyces rouxii ZYRO0B07436g I 0.788
TDEL_0E01520 Torulaspora delbrueckii TDEL_0E01520 I 0.788
STP4 Saccharomyces cerevisiae YDL048C D 0.788
3579_YDL048C Saccharomyces paradoxus 3579_YDL048C I 0.788
Scas_Contig670.2 Saccharomyces castellii Scas_Contig670.2 I 0.788
3742_YDL048C Saccharomyces bayanus 3742_YDL048C I 0.776
ZBAI_06958 Zygosaccharomyces bailii ZBAI_06958 I 0.776
SU7_0544 Saccharomyces arboricola SU7_0544 I 0.776
ZBAI_02561 Zygosaccharomyces bailii ZBAI_02561 I 0.776