CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMAC_04329
(
Sordaria macrospora
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
SMAC_04329
T128985_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
msn-1
M01192_2.00
Neurospora crassa
VCCCCTDW
WHAGGGGB
PBM
Lambert et al.(2019)
pTH8923
0.822
0.978
CAGL0L06072g
M01033_2.00
Candida glabrata
CCCCTDWNN
NNWHAGGGG
PBM
Siggers et al.(2014)
CAGL0K06027gCgla
0.756
0.717
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCC04962
C2H2 ZF
401
424
FKCDICNRRFRRQEHLKRHHRSLH
CCC04962
C2H2 ZF
430
452
FECNECGKKFSRSDNLSQHARTH
Links
Other
C2H2 ZF
family TFs
Other
Sordaria macrospora
TFs
142 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy