CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMAR000785
(
Strigamia maritima
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
SMAR000785
T129023_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
hkb
M03710_2.00
Drosophila melanogaster
VTCACGCCYHHN
NDDRGGCGTGAB
SELEX
Nitta et al.(2015)
hkb_1
0.776
0.826
hkb
M06470_2.00
Drosophila melanogaster
TCACGCCYM
KRGGCGTGA
B1H
Mathelier et al.(2014)
MA0450.1
0.776
0.826
hkb
M06168_2.00
Drosophila melanogaster
TCACGCCYM
KRGGCGTGA
B1H
Zhu et al.(2011)
hkb_NAR_FBgn0001204
0.776
0.826
hkb
M09666_2.00
Drosophila melanogaster
YMACGCCCMY
RKGGGCGTKR
Misc
Kulakovskiy et al.(2009)
hkb
0.776
0.826
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMAR000785-PA
C2H2 ZF
95
117
FRCPHCHVSFSNNGQLKGHVRIH
SMAR000785-PA
C2H2 ZF
123
147
FKCDHSQCGKTFTRNEELTRHKRIH
SMAR000785-PA
C2H2 ZF
153
175
FPCQVCGKRFGRKDHLKKHVKTH
Links
Other
C2H2 ZF
family TFs
Other
Strigamia maritima
TFs
48 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy