CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMAR003355
(
Strigamia maritima
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
SMAR003355
T129054_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BCL11B
M04453_2.00
Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC
SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX
0.802
0.894
BCL11B
M04454_2.00
Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC
SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX
0.802
0.894
BCL11A
M07926_2.00
Homo sapiens
BTYTCASTTCCYYHH
DDRRGGAASTGARAV
ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha
0.785
0.885
BCL11A
M08881_2.00
Homo sapiens
BHBYCABTTCCYBHNYN
NRNDVRGGAAVTGRVDV
Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A
0.785
0.885
BCL11A
M10187_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BCL11A_02
0.785
0.885
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMAR003355-PA
C2H2 ZF
414
435
SCEFCGKAFRFQSNLIVHRRSH
SMAR003355-PA
C2H2 ZF
441
463
YKCHICNHACTQASKLKRHMKTH
SMAR003355-PA
C2H2 ZF
807
829
DTCEYCGKVFKNCSNLTVHRRSH
SMAR003355-PA
C2H2 ZF
835
857
YKCELCSYACAQSSKLTRHMKTH
SMAR003355-PA
C2H2 ZF
865
886
YRCRFCDMPFSVPSTLEKHMRK
Links
Other
C2H2 ZF
family TFs
Other
Strigamia maritima
TFs
131 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ocbimv22018271m.g
Octopus bimaculoides
Ocbimv22018271m.g
I
0.821
ISCW016418
Ixodes scapularis
ISCW016418
I
0.815
im:7142702
Oryzias latipes
ENSORLG00000010488
I
0.804
PHUM606430
Pediculus humanus
PHUM606430
I
0.803
BCL11B
Gorilla gorilla
ENSGGOG00000001232
I
0.802
ENSGALG00000028278
Gallus gallus
ENSGALG00000028278
I
0.802
BCL11B
Otolemur garnettii
ENSOGAG00000033204
I
0.802
ENSPSIG00000013079
Pelodiscus sinensis
ENSPSIG00000013079
I
0.802
ENSGALG00000011127
Gallus gallus
ENSGALG00000011127
I
0.802
ENSPPYG00000006131
Pongo abelii
ENSPPYG00000006131
I
0.802
BCL11B
Homo sapiens
ENSG00000127152
D
0.802
im:7142702
Gasterosteus aculeatus
ENSGACG00000005537
I
0.802
BCL11B
Pan troglodytes
ENSPTRG00000006707
I
0.802
ENSPANG00000004313
Papio anubis
ENSPANG00000004313
I
0.802
BCL11B
Ornithorhynchus anatinus
ENSOANG00000014770
I
0.802
BCL11B
Sus scrofa
ENSSSCG00000002507
I
0.802
BCL11B
Macaca mulatta
ENSMMUG00000003261
I
0.802
ENSSHAG00000009291
Sarcophilus harrisii
ENSSHAG00000009291
I
0.802
BCL11B
Monodelphis domestica
ENSMODG00000012964
I
0.802
ENSSTOG00000021531
Ictidomys tridecemlineatus
ENSSTOG00000021531
I
0.802
BCL11B
Taeniopygia guttata
ENSTGUG00000012711
I
0.802
BCL11B
Loxodonta africana
ENSLAFG00000009254
I
0.802
BCL11B
Pteropus vampyrus
ENSPVAG00000015516
I
0.802
ENSNLEG00000000711
Nomascus leucogenys
ENSNLEG00000000711
I
0.802
ENSXMAG00000019910
Xiphophorus maculatus
ENSXMAG00000019910
I
0.802
Bcl11b
Mus musculus
ENSMUSG00000048251
I
0.802
BCL11B
Canis familiaris
ENSCAFG00000017809
I
0.802
BCL11B
Callithrix jacchus
ENSCJAG00000006713
I
0.802
Cmyd_10012109
Chelonia mydas
Cmyd_10012109
I
0.802
ENSCPOG00000009946
Cavia porcellus
ENSCPOG00000009946
I
0.802
BCL11B
Bos taurus
ENSBTAG00000018019
I
0.802
Gfo_R006733
Geospiza fortis
Gfo_R006733
I
0.802
Pvit_09536
Pogona vitticeps
Pvit_09536
I
0.802
ENSAMXG00000015839
Astyanax mexicanus
ENSAMXG00000015839
I
0.802
ENSAMXG00000018130
Astyanax mexicanus
ENSAMXG00000018130
I
0.802
ENSAPLG00000006283
Anas platyrhynchos
ENSAPLG00000006283
I
0.802
ENSACAG00000013085
Anolis carolinensis
ENSACAG00000013085
I
0.802
ENSCSAG00000010477
Chlorocebus sabaeus
ENSCSAG00000010477
I
0.802
Bcl11b
Rattus norvegicus
ENSRNOG00000005776
I
0.802
BCL11B
Dasypus novemcinctus
ENSDNOG00000012677
I
0.802
im:7142702
Danio rerio
ENSDARG00000067727
I
0.802
Aan_R000616
Calypte anna
Aan_R000616
I
0.802
ENSPFOG00000003609
Poecilia formosa
ENSPFOG00000003609
I
0.802
Afo_R004626
Aptenodytes forsteri
Afo_R004626
I
0.802
Sakowv30026316m.g
Saccoglossus kowalevskii
Sakowv30026316m.g
I
0.800
im:7142702
Takifugu rubripes
ENSTRUG00000018074
I
0.800
ENSONIG00000001067
Oreochromis niloticus
ENSONIG00000001067
I
0.800
RPRC001562
Rhodnius prolixus
RPRC001562
I
0.799
ENSP00000349723
Macaca fascicularis
ENSP00000349723
I
0.799
BCL11B
Tursiops truncatus
ENSTTRG00000012140
I
0.797
ENSPFOG00000007224
Poecilia formosa
ENSPFOG00000007224
I
0.795
bcl11ab
Gasterosteus aculeatus
ENSGACG00000019222
I
0.795
ENSLOCG00000016135
Lepisosteus oculatus
ENSLOCG00000016135
I
0.795
bcl11ba
Gasterosteus aculeatus
ENSGACG00000013118
I
0.795
ENSXMAG00000020344
Xiphophorus maculatus
ENSXMAG00000020344
I
0.795
ENSGMOG00000015842
Gadus morhua
ENSGMOG00000015842
I
0.795
ENSGMOG00000012414
Gadus morhua
ENSGMOG00000012414
I
0.795
L798_02171
Zootermopsis nevadensis
L798_02171
I
0.794
HHAL008065-PA
Halyomorpha halys
HHAL008065-PA
I
0.792
bcl11ba
Tetraodon nigroviridis
ENSTNIG00000008283
I
0.792
ENSPFOG00000007302
Poecilia formosa
ENSPFOG00000007302
I
0.792
bcl11ab
Takifugu rubripes
ENSTRUG00000013751
I
0.792
bcl11ab
Tetraodon nigroviridis
ENSTNIG00000012076
I
0.792
bcl11ba
Takifugu rubripes
ENSTRUG00000003531
I
0.792
bcl11ab
Oryzias latipes
ENSORLG00000013169
I
0.792
ENSLOCG00000008679
Lepisosteus oculatus
ENSLOCG00000008679
I
0.792
bcl11ab
Danio rerio
ENSDARG00000063153
I
0.792
ENSONIG00000018855
Oreochromis niloticus
ENSONIG00000018855
I
0.792
ENSONIG00000011060
Oreochromis niloticus
ENSONIG00000011060
I
0.792
bcl11ba
Oryzias latipes
ENSORLG00000010826
I
0.792
bcl11aa
Danio rerio
ENSDARG00000061352
I
0.792
ENSOCUG00000024296
Oryctolagus cuniculus
ENSOCUG00000024296
I
0.791
BCL11A
Ornithorhynchus anatinus
ENSOANG00000012402
I
0.787
im:7142702
Tetraodon nigroviridis
ENSTNIG00000009693
I
0.787
ENSLACG00000003560
Latimeria chalumnae
ENSLACG00000003560
I
0.787
Aan_R006276
Calypte anna
Aan_R006276
I
0.785
Bcl11a
Dipodomys ordii
ENSDORG00000010064
I
0.785
ENSFALG00000011123
Ficedula albicollis
ENSFALG00000011123
I
0.785
BCL11A
Felis catus
ENSFCAG00000027154
I
0.785
BCL11A
Erinaceus europaeus
ENSEEUG00000010958
I
0.785
Afo_R011357
Aptenodytes forsteri
Afo_R011357
I
0.785
BCL11A
Dasypus novemcinctus
ENSDNOG00000019842
I
0.785
SPU_018909
Strongylocentrotus purpuratus
SPU_018909
I
0.785
ENSBTAP00000023987-D2
Bos grunniens
ENSBTAP00000023987-D2
I
0.785
Pvit_18645
Pogona vitticeps
Pvit_18645
I
0.785
ENSAMXG00000004597
Astyanax mexicanus
ENSAMXG00000004597
I
0.785
ENSAMEG00000015813
Ailuropoda melanoleuca
ENSAMEG00000015813
I
0.785
BCL11A
Anolis carolinensis
ENSACAG00000015159
I
0.785
bcl11a
Xenopus tropicalis
XB-GENE-486641
I
0.785
Gfo_R008167
Geospiza fortis
Gfo_R008167
I
0.785
ENSAPLG00000007735
Anas platyrhynchos
ENSAPLG00000007735
I
0.785
BCL11A
Cavia porcellus
ENSCPOG00000007587
I
0.785
Cmyd_10008592
Chelonia mydas
Cmyd_10008592
I
0.785
BCL11A
Homo sapiens
ENSG00000119866
D
0.785
ENSP00000338774
Macaca fascicularis
ENSP00000338774
I
0.785
BCL11A
Callithrix jacchus
ENSCJAG00000009226
I
0.785
Alligator_sinensis_CCG008166.1
Alligator sinensis
Alligator_sinensis_CCG008166.1
I
0.785
BCL11A
Vicugna pacos
ENSVPAG00000000491
I
0.785
BCL11A
Microcebus murinus
ENSMICG00000015052
I
0.785
BCL11A
Sus scrofa
ENSSSCG00000008392
I
0.785
ENSSTOG00000004523
Ictidomys tridecemlineatus
ENSSTOG00000004523
I
0.785
BCL11A
Meleagris gallopavo
ENSMGAG00000013042
I
0.785
ENSMMUG00000011303
Macaca mulatta
ENSMMUG00000011303
I
0.785
Bcl11a
Rattus norvegicus
ENSRNOG00000007049
I
0.785
ENSPSIG00000013644
Pelodiscus sinensis
ENSPSIG00000013644
I
0.785
BCL11A
Oryctolagus cuniculus
ENSOCUG00000023948
I
0.785
BCL11A
Pteropus vampyrus
ENSPVAG00000000042
I
0.785
Bcl11a
Mus musculus
ENSMUSG00000000861
I
0.785
BCL11A
Taeniopygia guttata
ENSTGUG00000006790
I
0.785
ENSSHAG00000015804
Sarcophilus harrisii
ENSSHAG00000015804
I
0.785
BCL11A
Tursiops truncatus
ENSTTRG00000006191
I
0.785
ENSGALG00000007866
Gallus gallus
ENSGALG00000007866
I
0.785
BCL11A
Gorilla gorilla
ENSGGOG00000007337
I
0.785
ENSMEUG00000001829
Macropus eugenii
ENSMEUG00000001829
I
0.785
BCL11A
Loxodonta africana
ENSLAFG00000003101
I
0.785
ENSTSYG00000009153
Tarsius syrichta
ENSTSYG00000009153
I
0.785
ACYPI007319
Acyrthosiphon pisum
ACYPI007319
I
0.783
bcl11aa
Takifugu rubripes
ENSTRUG00000003815
I
0.783
ENSXMAG00000007242
Xiphophorus maculatus
ENSXMAG00000007242
I
0.783
ENSPFOG00000019062
Poecilia formosa
ENSPFOG00000019062
I
0.781
bcl11aa
Oryzias latipes
ENSORLG00000001704
I
0.781
LotgiG139415
Lottia gigantea
LotgiG139415
I
0.781
ENSONIG00000002906
Oreochromis niloticus
ENSONIG00000002906
I
0.781
bcl11aa
Gasterosteus aculeatus
ENSGACG00000013419
I
0.781
AMEC015245
Anopheles melas
AMEC015245
I
0.777
BGLB012676
Biomphalaria glabrata
BGLB012676
I
0.777
ASIS012904
Anopheles sinensis
ASIS012904
N
0.775
AARA004246
Anopheles arabiensis
AARA004246
N
0.774
ACUA026076
Anopheles culicifacies
ACUA026076
N
0.764
ADIR010253
Anopheles dirus
ADIR010253
N
0.763
CapteG65449
Capitella teleta
CapteG65449
I
0.762