SMAR013549 (Strigamia maritima)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 SMAR013549 T129153_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
erm
M03686_2.00
Drosophila melanogaster
TGATTGCTCWTTT

AAAWGAGCAATCA
SELEX
Nitta et al.(2015)
CG31670_1
0.814 0.913
erm
M06128_2.00
Drosophila melanogaster
KWTGYKCWTTT

AAAWGMRCAWM
B1H
Zhu et al.(2011)
CG31670_SANGER_5_FBgn0031375
0.814 0.913
erm
M06129_2.00
Drosophila melanogaster
BBRTTGCTCWTTTBN

NVAAAWGAGCAAYVV
B1H
Zhu et al.(2011)
CG31670_SOLEXA_5_FBgn0031375
0.814 0.913
FEZF1
M08307_2.00
Homo sapiens
NNBTGYYYTTTTNNN

NNNAAAARRRCAVNN
ChIP-seq
Schmitges et al.(2016)
A0PJY2_1-5.RCADE
0.804 0.913
FEZF1
M08889_2.00
Homo sapiens
DYTGYYCWTTTN

NAAAWGRRCARH
Misc
Kulakovskiy et al.(2013)
FEZF1_HUMAN.H11MO.0.C
0.804 0.913
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMAR013549-PA C2H2 ZF 197 219
SMAR013549-PA C2H2 ZF 225 247
SMAR013549-PA C2H2 ZF 253 275
SMAR013549-PA C2H2 ZF 281 303
SMAR013549-PA C2H2 ZF 309 331
SMAR013549-PA C2H2 ZF 337 360

Links

Other C2H2 ZF family TFs
Other Strigamia maritima TFs

Invalid Input OrderBy

171 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action