SMAR015659 (Strigamia maritima)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 SMAR015659 T129178_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF76
M04398_2.00
Homo sapiens
NNHWCCCABAATGCAHYRCRN

NYGYRDTGCATTVTGGGWDNN
SELEX
Yin et al.(2017)
ZNF76_eDBD_HT-SELEX
0.770 0.839
ZNF76
M08278_2.00
Homo sapiens
BCSCRNDGSMTBCTGGGARNT

ANYTCCCAGVAKSCHNYGSGV
ChIP-seq
Schmitges et al.(2016)
P36508_1-7.RCADE
0.770 0.839
ZNF76
M08856_2.00
Homo sapiens
ACTMCMHYTCCCAGVRKSCHHY

RDDGSMYBCTGGGARDKGKAGT
Misc
Kulakovskiy et al.(2013)
ZNF76_HUMAN.H11MO.0.C
0.770 0.839
ZNF76
M04399_2.00
Homo sapiens
NYTWCCCAYAATGCAHYRCDN

NHGYRDTGCATTRTGGGWARN
SELEX
Yin et al.(2017)
ZNF76_eDBD_Methyl-HT-SELEX
0.770 0.839
Zfp143
M09010_2.00
Mus musculus
RRACTACAWYTCCCAGVRKSCH

DGSMYBCTGGGARWTGTAGTYY
Misc
Kulakovskiy et al.(2013)
ZN143_MOUSE.H11MO.0.A
0.769 0.832
ZNF143
M02899_2.00
Homo sapiens
YWCCCAYAATGCAYYG

CRRTGCATTRTGGGWR
SELEX
Jolma et al.(2013)
ZNF143_1
0.769 0.826
ZNF143
M07931_2.00
Homo sapiens
RACTACAWYTCCCAG

CTGGGARWTGTAGTY
ChIP-seq
Gerstein et al.(2012)
GM12878_ZNF143_Stanford
0.769 0.826
ZNF143
M08910_2.00
Homo sapiens
RRACTACAWYTCCCAGVRKSCH

DGSMYBCTGGGARWTGTAGTYY
Misc
Kulakovskiy et al.(2013)
ZN143_HUMAN.H11MO.0.A
0.769 0.826
ZNF143
M09510_2.00
Homo sapiens
NNYTCCCAKVAKSCH

DGSMTBMTGGGARNN
Misc
Heinz et al.(2010)
CUTLL-ZNF143_GSE29600
0.769 0.826
ZNF143
M10247_2.00
Homo sapiens
NYYWCCCABMATGCAHYRCRNB

VNYGYRDTGCATKVTGGGWRRN
Transfac
Matys et al.(2006)
V$STAF_01
0.769 0.826
ZNF143
M10248_2.00
Homo sapiens
MHBWCCCAKVRTBCMWHGMRV

BYKCDWKGVAYBMTGGGWVDK
Transfac
Matys et al.(2006)
V$STAF_02
0.769 0.826
ZNF143
M10249_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STAF_Q4_01
0.769 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMAR015659-PA C2H2 ZF 181 205
SMAR015659-PA C2H2 ZF 211 235
SMAR015659-PA C2H2 ZF 241 265
SMAR015659-PA C2H2 ZF 271 295
SMAR015659-PA C2H2 ZF 301 325
SMAR015659-PA C2H2 ZF 331 355
SMAR015659-PA C2H2 ZF 361 384

Links

Other C2H2 ZF family TFs
Other Strigamia maritima TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAH73068 Xenopus laevis AAH73068 I 0.770
Aan_R006576 Calypte anna Aan_R006576 I 0.769
Afo_R002092 Aptenodytes forsteri Afo_R002092 I 0.772
Afo_R014591 Aptenodytes forsteri Afo_R014591 I 0.769
Alligator_sinensis_CCG018668.1 Alligator sinensis Alligator_sinensis_CCG018668.1 I 0.769
Alligator_sinensis_CCG020455.1 Alligator sinensis Alligator_sinensis_CCG020455.1 I 0.780
BGLB001048 Biomphalaria glabrata BGLB001048 I 0.763
Brh_R005520 Buceros rhinoceros Brh_R005520 I 0.769
Cmyd_10011173 Chelonia mydas Cmyd_10011173 I 0.772
ENSAMEG00000000752 Ailuropoda melanoleuca ENSAMEG00000000752 I 0.770
ENSAMEG00000003872 Ailuropoda melanoleuca ENSAMEG00000003872 I 0.769
ENSAMXG00000003833 Astyanax mexicanus ENSAMXG00000003833 I 0.767
ENSAMXG00000008869 Astyanax mexicanus ENSAMXG00000008869 I 0.774
ENSAPLG00000002385 Anas platyrhynchos ENSAPLG00000002385 I 0.769
ENSAPLG00000005226 Anas platyrhynchos ENSAPLG00000005226 I 0.756
ENSBTAP00000008112-D1 Bos grunniens ENSBTAP00000008112-D1 I 0.770
ENSCSAG00000004520 Chlorocebus sabaeus ENSCSAG00000004520 I 0.763
ENSCSAG00000009955 Chlorocebus sabaeus ENSCSAG00000009955 I 0.770
ENSFALG00000000985 Ficedula albicollis ENSFALG00000000985 I 0.769
ENSFALG00000003698 Ficedula albicollis ENSFALG00000003698 I 0.772
ENSGMOG00000001888 Gadus morhua ENSGMOG00000001888 I 0.767
ENSLACG00000017669 Latimeria chalumnae ENSLACG00000017669 I 0.767
ENSLOCG00000003619 Lepisosteus oculatus ENSLOCG00000003619 I 0.770
ENSLOCG00000011655 Lepisosteus oculatus ENSLOCG00000011655 I 0.783
ENSMEUG00000003014 Macropus eugenii ENSMEUG00000003014 I 0.769
ENSMPUG00000003522 Mustela putorius furo ENSMPUG00000003522 I 0.770
ENSMPUG00000012796 Mustela putorius furo ENSMPUG00000012796 I 0.769
ENSOARG00000012477 Ovis aries ENSOARG00000012477 I 0.767
ENSONIG00000015524 Oreochromis niloticus ENSONIG00000015524 I 0.767
ENSOPRG00000009136 Ochotona princeps ENSOPRG00000009136 I 0.770
ENSP00000363064 Macaca fascicularis ENSP00000363064 I 0.770
ENSP00000379847 Macaca fascicularis ENSP00000379847 I 0.769
ENSP00000379847-D1 Bos grunniens ENSP00000379847-D1 I 0.767
ENSPANG00000002501 Papio anubis ENSPANG00000002501 I 0.769
ENSPANG00000021154 Papio anubis ENSPANG00000021154 I 0.770
ENSPFOG00000008911 Poecilia formosa ENSPFOG00000008911 I 0.767
ENSPPYG00000003495 Pongo abelii ENSPPYG00000003495 I 0.769
ENSPPYG00000016525 Pongo abelii ENSPPYG00000016525 I 0.770
ENSPSIG00000005652 Pelodiscus sinensis ENSPSIG00000005652 I 0.772
ENSPSIG00000009683 Pelodiscus sinensis ENSPSIG00000009683 I 0.769
ENSSHAG00000009934 Sarcophilus harrisii ENSSHAG00000009934 I 0.770
ENSSTOG00000000256 Ictidomys tridecemlineatus ENSSTOG00000000256 I 0.770
ENSSTOG00000009647 Ictidomys tridecemlineatus ENSSTOG00000009647 I 0.762
ENSTGUG00000008153 Taeniopygia guttata ENSTGUG00000008153 I 0.769
ENSTSYG00000004324 Tarsius syrichta ENSTSYG00000004324 I 0.769
ENSXMAG00000005152 Xiphophorus maculatus ENSXMAG00000005152 I 0.767
estExt_fgenesh2_pg.C_1970081 Branchiostoma floridae estExt_fgenesh2_pg.C_1970081 I 0.777
Gfo_R002960 Geospiza fortis Gfo_R002960 I 0.772
Gfo_R011843 Geospiza fortis Gfo_R011843 I 0.769
LotgiG222832 Lottia gigantea LotgiG222832 I 0.794
Myotis_brandtii_ZNF143_10021171 Myotis brandtii Myotis_brandtii_ZNF143_10021171 I 0.765
Myotis_brandtii_ZNF76_10017771 Myotis brandtii Myotis_brandtii_ZNF76_10017771 I 0.770
Ocbimv22038914m.g Octopus bimaculoides Ocbimv22038914m.g I 0.802
Ogr18895 Ophisaurus gracilis Ogr18895 I 0.767
Pvit_03784 Pogona vitticeps Pvit_03784 I 0.769
Sakowv30036637m.g Saccoglossus kowalevskii Sakowv30036637m.g I 0.800
Sakowv30044960m.g Saccoglossus kowalevskii Sakowv30044960m.g I 0.800
Tal_R001092 Tyto alba Tal_R001092 I 0.769
Tal_R002540 Tyto alba Tal_R002540 I 0.770
Zfp143 Rattus norvegicus ENSRNOG00000010087 I 0.769
Zfp143 Mus musculus ENSMUSG00000061079 D 0.769
Zfp523 Rattus norvegicus ENSRNOG00000000501 I 0.770
Zfp523 Mus musculus ENSMUSG00000024220 I 0.770
znf143 Xenopus tropicalis XB-GENE-1012504 I 0.770
ZNF143 Tursiops truncatus ENSTTRG00000015353 I 0.767
ZNF143 Myotis lucifugus ENSMLUG00000000213 I 0.767
ZNF143 Microcebus murinus ENSMICG00000004353 I 0.769
ZNF143 Meleagris gallopavo ENSMGAG00000006206 I 0.769
ZNF143 Loxodonta africana ENSLAFG00000004487 I 0.769
ZNF143 Gallus gallus ENSGALG00000005787 I 0.769
ZNF143 Felis catus ENSFCAG00000002342 I 0.769
ZNF143 Erinaceus europaeus ENSEEUG00000000955 I 0.769
ZNF143 Equus caballus ENSECAG00000018889 I 0.769
ZNF143 Homo sapiens ENSG00000166478 D 0.769
ZNF143 Anolis carolinensis ENSACAG00000009338 I 0.769
ZNF143 Cavia porcellus ENSCPOG00000003109 I 0.769
ZNF143 Callithrix jacchus ENSCJAG00000011327 I 0.769
ZNF143 Canis familiaris ENSCAFG00000007373 I 0.769
znf143 Takifugu rubripes ENSTRUG00000009324 I 0.769
ZNF143 Oryctolagus cuniculus ENSOCUG00000005226 I 0.769
ZNF143 Pan troglodytes ENSPTRG00000003349 I 0.769
ZNF143 Macaca mulatta ENSMMUG00000008758 I 0.769
ZNF143 Otolemur garnettii ENSOGAG00000011518 I 0.769
ZNF143 Ornithorhynchus anatinus ENSOANG00000005853 I 0.766
ZNF143 Ochotona princeps ENSOPRG00000005466 I 0.769
ZNF143 Monodelphis domestica ENSMODG00000007909 I 0.769
ZNF143 Sorex araneus ENSSARG00000007780 I 0.769
znf143.S Xenopus laevis XB-GENE-1012509 I 0.769
znf143b Gasterosteus aculeatus ENSGACG00000009776 I 0.765
znf143b Oryzias latipes ENSORLG00000001130 I 0.762
znf143b Tetraodon nigroviridis ENSTNIG00000013739 I 0.769
znf143b Danio rerio ENSDARG00000041581 I 0.769
ZNF76 Oryctolagus cuniculus ENSOCUG00000015630 I 0.770
znf76 Danio rerio ENSDARG00000013279 I 0.781
ZNF76 Otolemur garnettii ENSOGAG00000002935 I 0.769
ZNF76 Callithrix jacchus ENSCJAG00000015519 I 0.770
ZNF76 Canis familiaris ENSCAFG00000001304 I 0.770
ZNF76 Bos taurus ENSBTAG00000006170 I 0.770
ZNF76 Choloepus hoffmanni ENSCHOG00000003197 I 0.770
ZNF76 Macaca mulatta ENSMMUG00000023559 I 0.770
ZNF76 Equus caballus ENSECAG00000014843 I 0.770
ZNF76 Pan troglodytes ENSPTRG00000018080 I 0.770
ZNF76 Taeniopygia guttata ENSTGUG00000001745 I 0.772
ZNF76 Myotis lucifugus ENSMLUG00000008610 I 0.770
ZNF76 Tursiops truncatus ENSTTRG00000009380 I 0.770
ZNF76 Monodelphis domestica ENSMODG00000013806 I 0.770
ZNF76 Sus scrofa ENSSSCG00000001537 I 0.770
ZNF76 Loxodonta africana ENSLAFG00000026071 I 0.770
ZNF76 Gorilla gorilla ENSGGOG00000014188 I 0.770
ZNF76 Cavia porcellus ENSCPOG00000007381 I 0.770
ZNF76 Homo sapiens ENSG00000065029 D 0.770
ZNF76 Felis catus ENSFCAG00000005893 I 0.770
ZNF76 Pteropus vampyrus ENSPVAG00000008041 I 0.770
ZNF76 Dasypus novemcinctus ENSDNOG00000015856 I 0.770