CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Smp_165420
(
Schistosoma mansoni
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
Smp_165420
T129259_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Smp_165420.1:pep
C2H2 ZF
127
149
YACKLCSKVYSQASALKMHVRTH
Smp_165420.1:pep
C2H2 ZF
153
175
CRCTHCGKSFSRKWLLKGHERTH
Smp_165420.1:pep
C2H2 ZF
181
203
YSCNVCSRSFADRSNLRAHMQTH
Smp_165420.1:pep
C2H2 ZF
209
230
YSCPHCPRSFSRMGLLNKHMIQ
Links
Other
C2H2 ZF
family TFs
Other
Schistosoma mansoni
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SMRZ_0000860401
Schistosoma margrebowiei
SMRZ_0000860401
N
0.825
SMTD_0000828401
Schistosoma mattheei
SMTD_0000828401
N
0.825
A_02434
Schistosoma haematobium
A_02434
N
0.825
SCUD_0000351101
Schistosoma curassoni
SCUD_0000351101
N
0.825
SROB_0000306401
Schistosoma rodhaini
SROB_0000306401
N
0.824
TRE_0000447301
Trichobilharzia regenti
TRE_0000447301
N
0.811
ECPE_0001462501
Echinostoma caproni
ECPE_0001462501
N
0.795
T265_11567
Opisthorchis viverrini
T265_11567
N
0.786
csin104700
Clonorchis sinensis
csin104700
N
0.786
PXEA_0002100701
Protopolystoma xenopodis
PXEA_0002100701
N
0.762