Smp_172460 (Schistosoma mansoni)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Smp_172460 T129266_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
cbt
M03705_2.00
Drosophila melanogaster
DMCACRCCCMY

RKGGGYGTGKH
SELEX
Nitta et al.(2015)
cbt_1
0.759 0.638
cbt
M03706_2.00
Drosophila melanogaster
RMCRCGCCCMCHH

DDGKGGGCGYGKY
SELEX
Nitta et al.(2015)
cbt_2
0.759 0.638
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Smp_172460.1:pep C2H2 ZF 437 461
Smp_172460.1:pep C2H2 ZF 467 491
Smp_172460.1:pep C2H2 ZF 497 519

Links

Other C2H2 ZF family TFs
Other Schistosoma mansoni TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A_03560 Schistosoma haematobium A_03560 I 0.827
csin110296 Clonorchis sinensis csin110296 N 0.787
D915_00578 Fasciola hepatica D915_00578 I 0.761
ENSAMXG00000019111 Astyanax mexicanus ENSAMXG00000019111 I 0.756
cbt Drosophila melanogaster FBgn0043364 D 0.759
cbt Drosophila ananassae FBgn0101744 I 0.759
cbt Drosophila erecta FBgn0116778 I 0.759
cbt Drosophila mojavensis FBgn0140770 I 0.759
cbt Drosophila sechellia FBgn0171577 I 0.759
cbt Drosophila simulans FBgn0194348 I 0.759
cbt Drosophila virilis FBgn0206865 I 0.759
cbt Drosophila willistoni FBgn0226609 I 0.759
cbt Drosophila yakuba FBgn0233632 I 0.759
LCUP009846 Lucilia cuprina LCUP009846 I 0.762
MDOA003755 Musca domestica MDOA003755 I 0.762
MDOA014851 Musca domestica MDOA014851 I 0.762
Sjc_0070890 Schistosoma japonicum Sjc_0070890 N 0.814
SMU15001129 Schmidtea mediterranea SMU15001129 I 0.757
T265_04314 Opisthorchis viverrini T265_04314 N 0.787