Smp_172460 (Schistosoma mansoni)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Smp_172460 T129266_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
cbt
M03705_2.00
Drosophila melanogaster
DMCACRCCCMY

RKGGGYGTGKH
SELEX
Nitta et al.(2015)
cbt_1
0.759 0.638
cbt
M03706_2.00
Drosophila melanogaster
RMCRCGCCCMCHH

DDGKGGGCGYGKY
SELEX
Nitta et al.(2015)
cbt_2
0.759 0.638
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Smp_172460.1:pep C2H2 ZF 437 461
Smp_172460.1:pep C2H2 ZF 467 491
Smp_172460.1:pep C2H2 ZF 497 519

Links

Other C2H2 ZF family TFs
Other Schistosoma mansoni TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
cbt Drosophila melanogaster FBgn0043364 D 0.759
ENSAMXG00000019111 Astyanax mexicanus ENSAMXG00000019111 I 0.756
D915_00578 Fasciola hepatica D915_00578 I 0.761
A_03560 Schistosoma haematobium A_03560 I 0.827
MDOA014851 Musca domestica MDOA014851 I 0.762
MDOA003755 Musca domestica MDOA003755 I 0.762
SMU15001129 Schmidtea mediterranea SMU15001129 I 0.757
LCUP009846 Lucilia cuprina LCUP009846 I 0.762
cbt Drosophila yakuba FBgn0233632 I 0.759
cbt Drosophila willistoni FBgn0226609 I 0.759
cbt Drosophila ananassae FBgn0101744 I 0.759
cbt Drosophila erecta FBgn0116778 I 0.759
cbt Drosophila mojavensis FBgn0140770 I 0.759
cbt Drosophila sechellia FBgn0171577 I 0.759
cbt Drosophila simulans FBgn0194348 I 0.759
cbt Drosophila virilis FBgn0206865 I 0.759
Sjc_0070890 Schistosoma japonicum Sjc_0070890 N 0.814
csin110296 Clonorchis sinensis csin110296 N 0.787
T265_04314 Opisthorchis viverrini T265_04314 N 0.787