CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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snap_masked-pir_contig_42-abinit-gene-0.59
(
Pythium irregulare
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
snap_masked-pir_contig_42-abinit-gene-0.59
T129277_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPI00000014370
C2H2 ZF
61
85
HVCDLPDCGKSFDSKWALIRHIRVH
EPrPI00000014370
C2H2 ZF
91
115
FPCTFPDCDKSFAEKSAMTRHLQTH
EPrPI00000014370
C2H2 ZF
121
145
FKCTYTGCTKSFKGKDYLEFHLKIH
EPrPI00000014370
C2H2 ZF
151
176
YACEHPSCSKTFCSPKSLKKHIRLWH
Links
Other
C2H2 ZF
family TFs
Other
Pythium irregulare
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PYU1_G004510
Pythium ultimum
PYU1_G004510
N
0.824
F443_19094
Phytophthora parasitica
F443_19094
N
0.816
Phyra77610
Phytophthora ramorum
Phyra77610
N
0.813
fgenesh_scip_prom.28083.11122
Phytophthora lateralis
fgenesh_scip_prom.28083.11122
N
0.813
PITG_02480
Phytophthora infestans
PITG_02480
N
0.813
Physo128284
Phytophthora sojae
Physo128284
N
0.810
maker-pve_contig_417-snap-gene-0.20
Pythium vexans
maker-pve_contig_417-snap-gene-0.20
N
0.799
maker-piw_contig_198-snap-gene-0.25
Pythium iwayamai
maker-piw_contig_198-snap-gene-0.25
N
0.779