CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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prz1
(
Schizosaccharomyces pombe
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
SPAC4G8.13c
T129407_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
prz1
M01185_2.00
Schizosaccharomyces pombe
HHVMGCCHCN
NGDGGCKBDD
PBM
Lambert et al.(2019)
pTH11143
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.755
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01185_2.00
C2H2 ZF
51
75
YVCTFAGCNKRFTRAYNLKSHMNTH
M01185_2.00
C2H2 ZF
81
103
FQCSICKKSFARQHDKRRHEQLH
M01185_2.00
C2H2 ZF
109
130
FACVTCNQRFARMDALNRHYKS
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SPAC4G8.13c.1
C2H2 ZF
570
594
YVCTFAGCNKRFTRAYNLKSHMNTH
SPAC4G8.13c.1
C2H2 ZF
600
622
FQCSICKKSFARQHDKRRHEQLH
SPAC4G8.13c.1
C2H2 ZF
628
649
FACVTCNQRFARMDALNRHYKS
Links
Other
C2H2 ZF
family TFs
Other
Schizosaccharomyces pombe
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SJAG_03879
Schizosaccharomyces japonicus
SJAG_03879
I
0.813
SPOG_03965
Schizosaccharomyces cryophilus
SPOG_03965
I
0.800
SOCG_02047
Schizosaccharomyces octosporus
SOCG_02047
I
0.800