SPU_012448 (Strongylocentrotus purpuratus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 SPU_012448 T129615_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ovo
M03669_2.00
Drosophila melanogaster
DNMCCGTTA

TAACGGKNH
SELEX
Nitta et al.(2015)
ovo_1
0.774 0.797
ovo
M06064_2.00
Drosophila melanogaster
CHGTTAHW

WDTAACDG
B1H
Zhu et al.(2011)
ovo_FlyReg_FBgn0003028
0.774 0.797
ovo
M06065_2.00
Drosophila melanogaster
RGTHCCGTTAT

ATAACGGDACY
B1H
Zhu et al.(2011)
ovo_SANGER_5_FBgn0003028
0.774 0.797
ovo
M06066_2.00
Drosophila melanogaster
DDTMCCGTTABNYN

NRNVTAACGGKAHH
B1H
Zhu et al.(2011)
ovo_SOLEXA_5_FBgn0003028
0.774 0.797
ovo
M02671_2.00
Drosophila melanogaster
DCNGTTWSD

HSWAACNGH
SELEX
Mathelier et al.(2014)
MA0126.1
0.774 0.797
ovo
M09662_2.00
Drosophila melanogaster
DCNGTTAMWNNDV

BHNNWKTAACNGH
Misc
Kulakovskiy et al.(2009)
ovo
0.774 0.797
ovo
M10373_2.00
Drosophila melanogaster
NNNDCNGTTWSDDNN

NNHHSWAACNGHNNN
Transfac
Matys et al.(2006)
I$OVO_01
0.774 0.797
ovo
M10374_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$OVO_Q6
0.774 0.797
lin-48
M00614_2.00
Caenorhabditis elegans
HCCGTTAB

VTAACGGD
PBM
Narasimhan et al.(2015)
pTH9155
0.774 0.783
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SPU_012448-tr C2H2 ZF 727 749
SPU_012448-tr C2H2 ZF 755 777
SPU_012448-tr C2H2 ZF 783 806

Links

Other C2H2 ZF family TFs
Other Strongylocentrotus purpuratus TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000019668 Ailuropoda melanoleuca ENSAMEG00000019668 N 0.000
ZBTB38 Bos taurus ENSBTAG00000040061 N 0.000
ZBTB38 Canis familiaris ENSCAFG00000007664 N 0.000
ZBTB38 Callithrix jacchus ENSCJAG00000031471 N 0.000
ZBTB38 Dasypus novemcinctus ENSDNOG00000037832 N 0.000
ENSDORG00000005705 Dipodomys ordii ENSDORG00000005705 N 0.000
ZBTB38 Erinaceus europaeus ENSEEUG00000000264 N 0.000
ZBTB38 Felis catus ENSFCAG00000030922 N 0.000
ZBTB38 Homo sapiens ENSG00000177311 N 0.000
ZBTB38 Gorilla gorilla ENSGGOG00000023008 N 0.000
ZBTB38 Myotis lucifugus ENSMLUG00000012512 N 0.000
ZBTB38 Macaca mulatta ENSMMUG00000031526 N 0.000
ENSMPUG00000019344 Mustela putorius furo ENSMPUG00000019344 N 0.000
Zbtb38 Mus musculus ENSMUSG00000040433 N 0.000
ENSNLEG00000004569 Nomascus leucogenys ENSNLEG00000004569 N 0.000
ENSOARG00000015487 Ovis aries ENSOARG00000015487 N 0.000
ZBTB38 Otolemur garnettii ENSOGAG00000009394 N 0.000
ZBTB38 Ochotona princeps ENSOPRG00000009539 N 0.000
ENSP00000372635 Macaca fascicularis ENSP00000372635 N 0.000
ENSP00000406955-D1 Bos grunniens ENSP00000406955-D1 N 0.000
ENSPANG00000018989 Papio anubis ENSPANG00000018989 N 0.000
ZBTB38 Pan troglodytes ENSPTRG00000030108 N 0.000
ZBTB38 Pteropus vampyrus ENSPVAG00000017499 N 0.000
Zbtb38 Rattus norvegicus ENSRNOG00000012386 N 0.000
ENSSSCG00000021674 Sus scrofa ENSSSCG00000021674 N 0.000
ZBTB38 Sus scrofa ENSSSCG00000022073 N 0.000
ENSSTOG00000025333 Ictidomys tridecemlineatus ENSSTOG00000025333 N 0.000
ENSTSYG00000009951 Tarsius syrichta ENSTSYG00000009951 N 0.000
ZBTB38 Vicugna pacos ENSVPAG00000007353 N 0.000
Myotis_brandtii_ZBTB38_10028248 Myotis brandtii Myotis_brandtii_ZBTB38_10028248 N 0.000