SU7_0636 (Saccharomyces arboricola)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 SU7_0636 T129862_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GIS1
M00019_2.00
Saccharomyces cerevisiae
NCCCCTWDNN

NNHWAGGGGN
PBM
Badis et al.(2008)
GIS1_4481
0.827 1.000
GIS1
M07449_2.00
Saccharomyces cerevisiae
HCCCCTWDN

NHWAGGGGD
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0306.1
0.827 1.000
GIS1
M08515_2.00
Saccharomyces cerevisiae
HCCCCTWDN

NHWAGGGGD
Misc
DeBoer et al.(2011)
YDR096W_562
0.827 1.000
RPH1
M00025_2.00
Saccharomyces cerevisiae
NNHCCCCTAAN

NTTAGGGGDNN
PBM
Badis et al.(2008)
RPH1_4571
0.816 0.911
RPH1
M01531_2.00
Saccharomyces cerevisiae
YNMCCCCTWWWW

WWWWAGGGGKNR
PBM
Zhu et al.(2009)
Rph1
0.816 0.911
RPH1
M07455_2.00
Saccharomyces cerevisiae
NCCCCTWA

TWAGGGGN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0372.1
0.816 0.911
RPH1
M08522_2.00
Saccharomyces cerevisiae
NCCCCTWA

TWAGGGGN
Misc
DeBoer et al.(2011)
YER169W_547
0.816 0.911
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJS44293 C2H2 ZF 856 879
EJS44293 C2H2 ZF 885 906

Links

Other C2H2 ZF family TFs
Other Saccharomyces arboricola TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA010080 Oryza indica BGIOSGA010080 I 0.000
BGIOSGA037855 Oryza indica BGIOSGA037855 I 0.000
BRADI1G12770 Brachypodium distachyon BRADI1G12770 I 0.000
BRADI1G12780 Brachypodium distachyon BRADI1G12780 N 0.000
BRADI4G00920 Brachypodium distachyon BRADI4G00920 I 0.000
F775_02410 Aegilops tauschii F775_02410 N 0.000
F775_11635 Aegilops tauschii F775_11635 I 0.000
F775_12145 Aegilops tauschii F775_12145 N 0.000
F775_14202 Aegilops tauschii F775_14202 N 0.000
GLYMA05G23291 Glycine max GLYMA05G23291 I 0.000
GLYMA17G16741 Glycine max GLYMA17G16741 I 0.000
GRMZM2G049686 Zea mays GRMZM2G049686 I 0.000
GRMZM2G068604 Zea mays GRMZM2G068604 I 0.000
GRMZM2G155043 Zea mays GRMZM2G155043 I 0.000
GRMZM2G355469 Zea mays GRMZM2G355469 I 0.000
LPERR03G24050 Leersia perrieri LPERR03G24050 I 0.000
LPERR12G16560 Leersia perrieri LPERR12G16560 I 0.000
MLOC_13159 Hordeum vulgare MLOC_13159 N 0.000
MLOC_42946 Hordeum vulgare MLOC_42946 I 0.000
MTR_4g092700 Medicago truncatula MTR_4g092700 N 0.000
MTR_4g097940 Medicago truncatula MTR_4g097940 I 0.000
OB03G36530 Oryza brachyantha OB03G36530 I 0.000
OBART12G19700 Oryza barthii OBART12G19700 I 0.000
OGLUM03G29270 Oryza glumaepatula OGLUM03G29270 I 0.000
OGLUM12G21470 Oryza glumaepatula OGLUM12G21470 I 0.000
OLONG_002504 Oryza longistaminata OLONG_002504 I 0.000
OLONG_017178 Oryza longistaminata OLONG_017178 I 0.000
OMERI03G25360 Oryza meridionalis OMERI03G25360 I 0.000
OMERI12G15000 Oryza meridionalis OMERI12G15000 I 0.000
ONIVA03G07570 Oryza nivara ONIVA03G07570 I 0.000
OPUNC03G26600 Oryza punctata OPUNC03G26600 I 0.000
OPUNC12G17950 Oryza punctata OPUNC12G17950 I 0.000
ORGLA03G0269200 Oryza glaberrima ORGLA03G0269200 I 0.000
ORGLA12G0170500 Oryza glaberrima ORGLA12G0170500 I 0.000
ORUFI12G22050 Oryza rufipogon ORUFI12G22050 I 0.000
OS12G0632600 Oryza sativa OS12G0632600 I 0.000
Pavir.Ia01004 Panicum virgatum Pavir.Ia01004 I 0.000
Pavir.Ia01038 Panicum virgatum Pavir.Ia01038 I 0.000
Pavir.Ia01059 Panicum virgatum Pavir.Ia01059 I 0.000
Pavir.Ib04096 Panicum virgatum Pavir.Ib04096 I 0.000
Pavir.Ib04188 Panicum virgatum Pavir.Ib04188 I 0.000
Pavir.Ib04190 Panicum virgatum Pavir.Ib04190 I 0.000
Pavir.J30022 Panicum virgatum Pavir.J30022 I 0.000
Sb01g012260 Sorghum bicolor Sb01g012260 I 0.000
Sb01g012280 Sorghum bicolor Sb01g012280 I 0.000
Sb06g017460 Sorghum bicolor Sb06g017460 I 0.000
Sb08g022760 Sorghum bicolor Sb08g022760 I 0.000
Si011972m.g Setaria italica Si011972m.g I 0.000
Si036185m.g Setaria italica Si036185m.g I 0.000
Si038721m.g Setaria italica Si038721m.g I 0.000
Si039325m.g Setaria italica Si039325m.g I 0.000
Traes_4BL_19F19CCC0 Triticum aestivum Traes_4BL_19F19CCC0 N 0.000
Traes_4DS_6A9EB40A4 Triticum aestivum Traes_4DS_6A9EB40A4 I 0.000
TRIUR3_05977 Triticum urartu TRIUR3_05977 I 0.000
TRIUR3_19095 Triticum urartu TRIUR3_19095 N 0.000
TRIUR3_27148 Triticum urartu TRIUR3_27148 N 0.000