SU7_0636 (Saccharomyces arboricola)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 SU7_0636 T129862_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GIS1
M00019_2.00
Saccharomyces cerevisiae
NCCCCTWDNN

NNHWAGGGGN
PBM
Badis et al.(2008)
GIS1_4481
0.827 1.000
GIS1
M07449_2.00
Saccharomyces cerevisiae
HCCCCTWDN

NHWAGGGGD
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0306.1
0.827 1.000
GIS1
M08515_2.00
Saccharomyces cerevisiae
HCCCCTWDN

NHWAGGGGD
Misc
DeBoer et al.(2011)
YDR096W_562
0.827 1.000
RPH1
M00025_2.00
Saccharomyces cerevisiae
NNHCCCCTAAN

NTTAGGGGDNN
PBM
Badis et al.(2008)
RPH1_4571
0.816 0.911
RPH1
M01531_2.00
Saccharomyces cerevisiae
YNMCCCCTWWWW

WWWWAGGGGKNR
PBM
Zhu et al.(2009)
Rph1
0.816 0.911
RPH1
M07455_2.00
Saccharomyces cerevisiae
NCCCCTWA

TWAGGGGN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0372.1
0.816 0.911
RPH1
M08522_2.00
Saccharomyces cerevisiae
NCCCCTWA

TWAGGGGN
Misc
DeBoer et al.(2011)
YER169W_547
0.816 0.911
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJS44293 C2H2 ZF 856 879
EJS44293 C2H2 ZF 885 906

Links

Other C2H2 ZF family TFs
Other Saccharomyces arboricola TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00009p00257990 Amborella trichopoda AMTR_s00009p00257990 N 0.000
evm.TU.supercontig_43.122 Carica papaya evm.TU.supercontig_43.122 N 0.000
evm.TU.supercontig_1993.2 Carica papaya evm.TU.supercontig_1993.2 N 0.000
mgf004018m Mimulus guttatus mgf004018m N 0.000
e_gw1.389.24.1 Physcomitrella patens e_gw1.389.24.1 N 0.000
e_gw1.2.476.1 Physcomitrella patens e_gw1.2.476.1 N 0.000
e_gw1.1.456.1 Physcomitrella patens e_gw1.1.456.1 N 0.000
Ca_16645 Cicer arietinum Ca_16645 N 0.000
Traes_2BL_216652F6B Triticum aestivum Traes_2BL_216652F6B N 0.000
PRUPE_ppa018086mg Prunus persica PRUPE_ppa018086mg N 0.000
OS08G0433400 Oryza sativa OS08G0433400 N 0.000
GLYMA05G17994 Glycine max GLYMA05G17994 N 0.000
Pavir.Aa01543 Panicum virgatum Pavir.Aa01543 N 0.000