CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TBLA_0E04220
(
Tetrapisispora blattae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
TBLA_0E04220
T129902_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RPH1
M00025_2.00
Saccharomyces cerevisiae
NNHCCCCTAAN
NTTAGGGGDNN
PBM
Badis et al.(2008)
RPH1_4571
0.759
0.800
RPH1
M01531_2.00
Saccharomyces cerevisiae
YNMCCCCTWWWW
WWWWAGGGGKNR
PBM
Zhu et al.(2009)
Rph1
0.759
0.800
RPH1
M07455_2.00
Saccharomyces cerevisiae
NCCCCTWA
TWAGGGGN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0372.1
0.759
0.800
RPH1
M08522_2.00
Saccharomyces cerevisiae
NCCCCTWA
TWAGGGGN
Misc
DeBoer et al.(2011)
YER169W_547
0.759
0.800
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCH61476
C2H2 ZF
447
470
SYCFECRRSFSSSHHLTRHRKTVH
CCH61476
C2H2 ZF
476
497
FSCPKCGKRFKRRDHVLQHLNK
Links
Other
C2H2 ZF
family TFs
Other
Tetrapisispora blattae
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy