CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TC004673
(
Tribolium castaneum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
TC004673
T129984_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
erm
M03686_2.00
Drosophila melanogaster
TGATTGCTCWTTT
AAAWGAGCAATCA
SELEX
Nitta et al.(2015)
CG31670_1
0.800
0.920
erm
M06128_2.00
Drosophila melanogaster
KWTGYKCWTTT
AAAWGMRCAWM
B1H
Zhu et al.(2011)
CG31670_SANGER_5_FBgn0031375
0.800
0.920
erm
M06129_2.00
Drosophila melanogaster
BBRTTGCTCWTTTBN
NVAAAWGAGCAAYVV
B1H
Zhu et al.(2011)
CG31670_SOLEXA_5_FBgn0031375
0.800
0.920
FEZF1
M08307_2.00
Homo sapiens
NNBTGYYYTTTTNNN
NNNAAAARRRCAVNN
ChIP-seq
Schmitges et al.(2016)
A0PJY2_1-5.RCADE
0.790
0.884
FEZF1
M08889_2.00
Homo sapiens
DYTGYYCWTTTN
NAAAWGRRCARH
Misc
Kulakovskiy et al.(2013)
FEZF1_HUMAN.H11MO.0.C
0.790
0.884
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TC004673-PA
C2H2 ZF
136
158
FECGECGKVFNAHYNLTRHMPVH
TC004673-PA
C2H2 ZF
164
186
FVCKICGKGFRQASTLCRHKIIH
TC004673-PA
C2H2 ZF
192
214
HKCHTCGKAFNRSSTLNTHARIH
TC004673-PA
C2H2 ZF
220
242
FVCEYCGKGFHQKGNYKNHKLTH
TC004673-PA
C2H2 ZF
248
270
YKCTVCSKAFHQIYNLTFHMHTH
TC004673-PA
C2H2 ZF
276
299
FTCRVCGKGFCRNFDLKKHMRKLH
Links
Other
C2H2 ZF
family TFs
Other
Tribolium castaneum
TFs
177 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy