CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TCM_014903
(
Theobroma cacao
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
TCM_014903
T130179_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZAT9
M06817_2.00
Arabidopsis thaliana
YTACTWHH
DDWAGTAR
Dap-seq
OMalley et al.(2016)
At3g60580_col_a
0.780
0.804
ZAT4
M01168_2.00
Arabidopsis thaliana
NNHRSTN
NASYDNN
PBM
Lambert et al.(2019)
pTH11142
0.780
0.783
PK09091.1
M01200_2.00
Cannabis sativa
NHRCTNN
NNAGYDN
PBM
Lambert et al.(2019)
pTH10176
0.760
0.652
ZAT1
M01167_2.00
Arabidopsis thaliana
NHRCTNN
NNAGYDN
PBM
Lambert et al.(2019)
pTH10246
0.757
0.783
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOY22851
C2H2 ZF
199
221
YKCETCNRVFKSHQALGGHRASH
EOY22851
C2H2 ZF
257
279
FECPFCDKVFQSGQALGGHKKSH
Links
Other
C2H2 ZF
family TFs
Other
Theobroma cacao
TFs
58 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy