TCM_022001 (Theobroma cacao)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 TCM_022001 T130189_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G53600
M01856_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7188 		0.795 0.783
AT3G53600
M00858_2.00 		Arabidopsis thaliana
NNNNRSWN
NWSYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT18 		0.795 0.783
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.786 0.783
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.786 0.783
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.785 0.717
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.775 0.717
AT3G46070
M06813_2.00 		Arabidopsis thaliana
HYHHYHTCACTYHHH
DDDRAGTGADRDDRD		 Dap-seq
OMalley et al.(2016)
AT3G46070_col_a 		0.772 0.783
ZAT7
M01855_2.00 		Arabidopsis thaliana
NVDBRCACTNNNN
NNNNAGTGYVHBN		 PBM
Weirauch et al.(2014)
pTH7540 		0.761 0.761
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY07613 C2H2 ZF 87 109
EOY07613 C2H2 ZF 137 159

Links

Other C2H2 ZF family TFs
Other Theobroma cacao TFs

348 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_08411 Capronia coronata A1O1_08411 I 0.000
A1O3_03427 Capronia epimyces A1O3_03427 I 0.000
A1O5_00135 Cladophialophora psammophila A1O5_00135 I 0.000
A1O7_03498 Cladophialophora yegresii A1O7_03498 I 0.000
BBA_04116 Beauveria bassiana BBA_04116 I 0.000
CGGC5_1850 Colletotrichum gloeosporioides CGGC5_1850 I 0.000
CH063_10052 Colletotrichum higginsianum CH063_10052 I 0.000
Cob_10099 Colletotrichum orbiculare Cob_10099 I 0.000
CSUB01_05644 Colletotrichum sublineola CSUB01_05644 I 0.000
ENSCSAVG00000008339 Ciona savignyi ENSCSAVG00000008339 I 0.000
foxp1.S Xenopus laevis XB-GENE-961750 I 0.000
G647_04884 Cladophialophora carrionii G647_04884 I 0.000
GLRG_00119 Colletotrichum graminicola GLRG_00119 I 0.000
HMPREF1120_05555 Exophiala dermatitidis HMPREF1120_05555 I 0.000
PV04_03696 Capronia semiimmersa PV04_03696 I 0.000
PV05_05591 Exophiala xenobiotica PV05_05591 I 0.000
PV06_00250 Exophiala oligosperma PV06_00250 I 0.000
PV07_06572 Cladophialophora immunda PV07_06572 I 0.000
PV08_04098 Exophiala spinifera PV08_04098 I 0.000
PV11_01234 Exophiala sideris PV11_01234 I 0.000
SPU_009876 Strongylocentrotus purpuratus SPU_009876 I 0.000
UCREL1_4498 Eutypa lata UCREL1_4498 I 0.000
Z517_10228 Fonsecaea pedrosoi Z517_10228 I 0.000
Z518_01443 Rhinocladiella mackenziei Z518_01443 I 0.000
Z519_00136 Cladophialophora bantiana Z519_00136 I 0.000