CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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tetur01g09970
(
Tetranychus urticae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
tetur01g09970
T130320_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Mtf1
M00136_2.00
Mus musculus
CGTGYGCAM
KTGCRCACG
PBM
Badis et al.(2009)
Mtf1_2377
0.780
0.790
MTF1
M02922_2.00
Homo sapiens
GTGCCGTGTGCAAA
TTTGCACACGGCAC
SELEX
Jolma et al.(2013)
MTF1_1
0.780
0.790
MTF1
M04617_2.00
Homo sapiens
NDNDYCGTGTGCAAARN
NYTTTGCACACGRHNHN
SELEX
Yin et al.(2017)
MTF1_eDBD_HT-SELEX
0.780
0.790
MTF1
M08942_2.00
Homo sapiens
MGKVHCGTGYGCADMDB
VHKHTGCRCACGDBMCK
Misc
Kulakovskiy et al.(2013)
MTF1_HUMAN.H11MO.0.C
0.780
0.790
Mtf1
M08981_2.00
Mus musculus
MGKVHCGTGYGCADMDB
VHKHTGCRCACGDBMCK
Misc
Kulakovskiy et al.(2013)
MTF1_MOUSE.H11MO.0.C
0.780
0.790
MTF1
M10308_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MTF1_01
0.780
0.790
MTF1
M10309_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MTF1_02
0.780
0.790
MTF1
M10310_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MTF1_Q4
0.780
0.790
MTF1
M10311_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MTF1_Q5
0.780
0.790
MTF1
M04618_2.00
Homo sapiens
NRNRCCGTGTGCAAARV
BYTTTGCACACGGYNYN
SELEX
Yin et al.(2017)
MTF1_eDBD_Methyl-HT-SELEX
0.780
0.790
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
tetur01g09970.1
C2H2 ZF
194
218
FRCEFNDCRRTYSTAGNLKTHHKTH
tetur01g09970.1
C2H2 ZF
224
248
FVCNQEGCGKAFLTSYSLRIHTRVH
tetur01g09970.1
C2H2 ZF
254
278
FECQINGCEKAFNTLYRLKAHKRLH
tetur01g09970.1
C2H2 ZF
283
307
FNCSSDGCVKFFTTLSDLRKHWRTH
tetur01g09970.1
C2H2 ZF
313
337
YKCNQQGCGKSFSASHHLKTHIRTH
tetur01g09970.1
C2H2 ZF
343
367
YSCNQEGCRKSFTTQYSLKSHLTRH
Links
Other
C2H2 ZF
family TFs
Other
Tetranychus urticae
TFs
62 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy