CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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tetur14g01820
(
Tetranychus urticae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
tetur14g01820
T130397_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Kah
M03690_2.00
Drosophila melanogaster
NVCCACCTGTTN
NAACAGGTGGBN
SELEX
Nitta et al.(2015)
CG17181_1
0.767
0.823
Kah
M06137_2.00
Drosophila melanogaster
VCCACCTGT
ACAGGTGGB
B1H
Zhu et al.(2011)
CG17181_SANGER_5_FBgn0035144
0.767
0.823
Kah
M06138_2.00
Drosophila melanogaster
NVCCACCTGYHVVNN
NNBBDRCAGGTGGBN
B1H
Zhu et al.(2011)
CG17181_SOLEXA_5_FBgn0035144
0.767
0.823
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
tetur14g01820.1
C2H2 ZF
230
252
HVCIDCGKRYSTSSNLARHRQTH
tetur14g01820.1
C2H2 ZF
262
283
QCPHCNKVYVSMPAYSMHLRTH
tetur14g01820.1
C2H2 ZF
287
309
CRCTYCGKCFSRPWLLQGHIRTH
tetur14g01820.1
C2H2 ZF
315
337
FKCPTCSKAFADKSNLRAHIQTH
tetur14g01820.1
C2H2 ZF
343
364
YVCQRCGKAFTLKSYLYKHEDS
Links
Other
C2H2 ZF
family TFs
Other
Tetranychus urticae
TFs
47 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy