TRAES3BF044200110CFD_g (Triticum aestivum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 TRAES3BF044200110CFD_g T130558_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
STOP1
M06801_2.00
Arabidopsis thaliana
CCTBCMCCAGDTRHHMCYY

RRGKDDYAHCTGGKGVAGG
Dap-seq
OMalley et al.(2016)
STOP1_col_a
0.803 0.929
STOP1
M06802_2.00
Arabidopsis thaliana
RCCTNCMCCRGWWRN

NYWWCYGGKGNAGGY
Dap-seq
OMalley et al.(2016)
STOP1_colamp_a
0.803 0.929
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TRAES3BF044200110CFD_t1 C2H2 ZF 356 378
TRAES3BF044200110CFD_t1 C2H2 ZF 379 404

Links

Other C2H2 ZF family TFs
Other Triticum aestivum TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ERF118 Arabidopsis thaliana AT1G68550 D 0.000
SapurV1A.0079s0190 Salix purpurea SapurV1A.0079s0190 I 0.000
SapurV1A.0078s0470 Salix purpurea SapurV1A.0078s0470 I 0.000
Lus10034316.g Linum usitatissimum Lus10034316.g I 0.000
Gorai.008G183300 Gossypium raimondii Gorai.008G183300 I 0.000
Bostr.26959s0035 Boechera stricta Bostr.26959s0035 I 0.000
cassava43300.valid.m1 Manihot esculenta cassava43300.valid.m1 I 0.000
cassava35758.valid.m1 Manihot esculenta cassava35758.valid.m1 I 0.000
cassava35757.valid.m1 Manihot esculenta cassava35757.valid.m1 I 0.000
27524.m000298 Ricinus communis 27524.m000298 I 0.000
TCM_011811 Theobroma cacao TCM_011811 I 0.000
POPTR_0010s13540 Populus trichocarpa POPTR_0010s13540 I 0.000
POPTR_0008s11900 Populus trichocarpa POPTR_0008s11900 I 0.000
fgenesh2_kg.2__1107__AT1G68550.2 Arabidopsis lyrata fgenesh2_kg.2__1107__AT1G68550.2 I 0.000
Thhalv10019722m.g Eutrema salsugineum Thhalv10019722m.g I 0.000
Lus10035018.g Linum usitatissimum Lus10035018.g N 0.000
Lus10041456.g Linum usitatissimum Lus10041456.g N 0.000