CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_4DS_276818E4F
(
Triticum aestivum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
Traes_4DS_276818E4F
T130594_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT3G53600
M01856_2.00
Arabidopsis thaliana
NNHASWN
NWSTDNN
PBM
Weirauch et al.(2014)
pTH7188
0.765
0.674
AT3G53600
M00858_2.00
Arabidopsis thaliana
NNNNRSWN
NWSYNNNN
PBM
Franco-Zorrilla et al.(2014)
ZAT18
0.765
0.674
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_4DS_276818E4F.1
C2H2 ZF
48
70
YECRTCGRRFATFQALGGHRTSH
Traes_4DS_276818E4F.1
C2H2 ZF
98
120
HRCGTCRHAFPTGQALGGHMRRH
Links
Other
C2H2 ZF
family TFs
Other
Triticum aestivum
TFs
285 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy