CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRIVIDRAFT_83596
(
Trichoderma virens
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
TRIVIDRAFT_83596
T130867_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU06487
M01197_2.00
Neurospora crassa
NBMGCCKCNN
NNGMGGCKVN
PBM
Lambert et al.(2019)
pTH10205
0.807
0.899
NCU06487
M01887_2.00
Neurospora crassa
NBAGCCKCRH
DYGMGGCTVN
PBM
Weirauch et al.(2014)
pTH8951
0.807
0.899
XP_001540939.1
M01188_2.00
Histoplasma capsulatum
NBAGCCKCNN
NNGMGGCTVN
PBM
Lambert et al.(2019)
pTH11147
0.790
0.855
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EHK21025
C2H2 ZF
338
363
YSCTFPGCTAPPFQTQYLLNSHANVH
EHK21025
C2H2 ZF
369
398
HYCPVQGCPRSEGGKGFKRKNEMIRHGLVH
EHK21025
C2H2 ZF
403
429
YVCPFCADREHKYPRPDNLQRHVRVHH
Links
Other
C2H2 ZF
family TFs
Other
Trichoderma virens
TFs
92 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy