CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDAG_10032
(
Verticillium dahliae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
VDAG_10032
T131354_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU01629
M01191_2.00
Neurospora crassa
TRYGSCRC
GYGSCRYA
PBM
Lambert et al.(2019)
pTH9692
0.823
0.912
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EGY20403
C2H2 ZF
283
307
FQCEVKGCGKLFSRSYNFKAHMETH
EGY20403
C2H2 ZF
315
340
FPCQIGDCNKRFVRKTDLQRHHQSVH
EGY20403
C2H2 ZF
346
367
HKCDYCSRLFARKDTLRRHMED
Links
Other
C2H2 ZF
family TFs
Other
Verticillium dahliae
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDBG_03423
Verticillium alfalfae
VDBG_03423
I
0.827
VDBG_03423
Verticillium albo atrum
VDBG_03423
I
0.827
CGGC5_5349
Colletotrichum gloeosporioides
CGGC5_5349
I
0.824
NEUTE1DRAFT_130390
Neurospora tetrasperma
NEUTE1DRAFT_130390
I
0.823
CHGG_10292
Chaetomium globosum
CHGG_10292
I
0.823
SMAC_02359
Sordaria macrospora
SMAC_02359
I
0.823
THITE_2124193
Thielavia terrestris
THITE_2124193
I
0.823
estExt_fgenesh3_kg.C_100506
Neurospora discreta
estExt_fgenesh3_kg.C_100506
I
0.823
NCU01629
Neurospora crassa
NCU01629
D
0.823
MYCTH_2312442
Myceliophthora thermophila
MYCTH_2312442
I
0.820
F503_00525
Ophiostoma piceae uamh
F503_00525
I
0.820
GGTG_10358
Gaeumannomyces graminis
GGTG_10358
I
0.816
SBOR_4904
Sclerotinia borealis
SBOR_4904
I
0.816
SS1G_09588
Sclerotinia sclerotiorum
SS1G_09588
I
0.816
MAPG_02519
Magnaporthe poae
MAPG_02519
I
0.816
Bcin13g04290
Botrytis cinerea
Bcin13g04290
I
0.816
MBM_09584
Marssonina brunnea
MBM_09584
I
0.812
PODANS_6_5390
Podospora anserina
PODANS_6_5390
I
0.811
MGG_03133
Magnaporthe oryzae
MGG_03133
I
0.807
OIDMADRAFT_123149
Oidiodendron maius
OIDMADRAFT_123149
I
0.804
CH063_01157
Colletotrichum higginsianum
CH063_01157
I
0.798
HMPREF1624_08709
Sporothrix schenckii
HMPREF1624_08709
I
0.795
PFICI_07315
Pestalotiopsis fici
PFICI_07315
I
0.794
CFIO01_13709
Colletotrichum fioriniae
CFIO01_13709
I
0.791
GLRG_08739
Colletotrichum graminicola
GLRG_08739
I
0.782
S40288_06328
Stachybotrys chartarum
S40288_06328
I
0.777
S40285_07199
Stachybotrys chlorohalonata
S40285_07199
I
0.777
CSUB01_04852
Colletotrichum sublineola
CSUB01_04852
I
0.775
NechaG101360
Fusarium solani
NechaG101360
I
0.773
estExt_fgenesh1_pg.C_sca_11_chr8_3_00008
Nectria haematococca
estExt_fgenesh1_pg.C_sca_11_chr8_3_00008
I
0.773
FPSE_04814
Fusarium pseudograminearum
FPSE_04814
I
0.773
FFUJ_09752
Fusarium fujikuroi
FFUJ_09752
I
0.773
FOXG_13949
Fusarium oxysporum
FOXG_13949
I
0.773
FGRRES_04293
Fusarium graminearum
FGRRES_04293
I
0.773
ACRE_023020
Acremonium chrysogenum
ACRE_023020
I
0.773
PFICI_04978
Pestalotiopsis fici
PFICI_04978
I
0.772
e_gw1.2.1598.1
Cryphonectria parasitica
e_gw1.2.1598.1
I
0.765
FVEG_11371
Fusarium verticillioides
FVEG_11371
I
0.760