VDBG_03423 (Verticillium alfalfae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 VDBG_03423 T131364_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NCU01629
M01191_2.00
Neurospora crassa
TRYGSCRC

GYGSCRYA
PBM
Lambert et al.(2019)
pTH9692
0.823 0.912
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EEY17314 C2H2 ZF 278 302
EEY17314 C2H2 ZF 310 335
EEY17314 C2H2 ZF 341 362

Links

Other C2H2 ZF family TFs
Other Verticillium alfalfae TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
VDAG_10032 Verticillium dahliae VDAG_10032 I 0.827
VDBG_03423 Verticillium albo atrum VDBG_03423 I 0.827
CGGC5_5349 Colletotrichum gloeosporioides CGGC5_5349 I 0.824
NEUTE1DRAFT_130390 Neurospora tetrasperma NEUTE1DRAFT_130390 I 0.823
CHGG_10292 Chaetomium globosum CHGG_10292 I 0.823
SMAC_02359 Sordaria macrospora SMAC_02359 I 0.823
THITE_2124193 Thielavia terrestris THITE_2124193 I 0.823
estExt_fgenesh3_kg.C_100506 Neurospora discreta estExt_fgenesh3_kg.C_100506 I 0.823
NCU01629 Neurospora crassa NCU01629 D 0.823
MYCTH_2312442 Myceliophthora thermophila MYCTH_2312442 I 0.820
F503_00525 Ophiostoma piceae uamh F503_00525 I 0.820
GGTG_10358 Gaeumannomyces graminis GGTG_10358 I 0.816
SBOR_4904 Sclerotinia borealis SBOR_4904 I 0.816
SS1G_09588 Sclerotinia sclerotiorum SS1G_09588 I 0.816
MAPG_02519 Magnaporthe poae MAPG_02519 I 0.816
Bcin13g04290 Botrytis cinerea Bcin13g04290 I 0.816
MBM_09584 Marssonina brunnea MBM_09584 I 0.812
PODANS_6_5390 Podospora anserina PODANS_6_5390 I 0.811
MGG_03133 Magnaporthe oryzae MGG_03133 I 0.807
OIDMADRAFT_123149 Oidiodendron maius OIDMADRAFT_123149 I 0.804
CH063_01157 Colletotrichum higginsianum CH063_01157 I 0.798
HMPREF1624_08709 Sporothrix schenckii HMPREF1624_08709 I 0.795
PFICI_07315 Pestalotiopsis fici PFICI_07315 I 0.794
CFIO01_13709 Colletotrichum fioriniae CFIO01_13709 I 0.791
GLRG_08739 Colletotrichum graminicola GLRG_08739 I 0.782
S40288_06328 Stachybotrys chartarum S40288_06328 I 0.777
S40285_07199 Stachybotrys chlorohalonata S40285_07199 I 0.777
CSUB01_04852 Colletotrichum sublineola CSUB01_04852 I 0.775
NechaG101360 Fusarium solani NechaG101360 I 0.773
estExt_fgenesh1_pg.C_sca_11_chr8_3_00008 Nectria haematococca estExt_fgenesh1_pg.C_sca_11_chr8_3_00008 I 0.773
FPSE_04814 Fusarium pseudograminearum FPSE_04814 I 0.773
FFUJ_09752 Fusarium fujikuroi FFUJ_09752 I 0.773
FOXG_13949 Fusarium oxysporum FOXG_13949 I 0.773
FGRRES_04293 Fusarium graminearum FGRRES_04293 I 0.773
ACRE_023020 Acremonium chrysogenum ACRE_023020 I 0.773
PFICI_04978 Pestalotiopsis fici PFICI_04978 I 0.772
e_gw1.2.1598.1 Cryphonectria parasitica e_gw1.2.1598.1 I 0.765
FVEG_11371 Fusarium verticillioides FVEG_11371 I 0.760