VDBG_04504 (Verticillium alfalfae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 VDBG_04504 T131368_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU02666
M01875_2.00 		Neurospora crassa
NNNMGCCACN
NGTGGCKNNN		 PBM
Weirauch et al.(2014)
pTH8838 		0.803 0.882
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EEY18395 C2H2 ZF 261 283
EEY18395 C2H2 ZF 289 311
EEY18395 C2H2 ZF 317 338

Links

Other C2H2 ZF family TFs
Other Verticillium alfalfae TFs

Invalid Input OrderBy

130 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action