VDBG_06048 (Verticillium alfalfae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 VDBG_06048 T131374_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NCU07952
M01890_2.00
Neurospora crassa
YWNMGCCHY

RDGGCKNWR
PBM
Weirauch et al.(2014)
pTH9003
0.788 0.912
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EEY19939 C2H2 ZF 139 161
EEY19939 C2H2 ZF 167 189
EEY19939 C2H2 ZF 195 225

Links

Other C2H2 ZF family TFs
Other Verticillium alfalfae TFs

Invalid Input OrderBy

149 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action