VDBG_08073 (Verticillium alfalfae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 VDBG_08073 T131382_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HCBG_04116
M01448_2.00
Histoplasma capsulatum
RHCHGWGCDB

VHGCWCDGDY
PBM
Najafabadi et al.(2015a)
pTH11149
0.804 0.913
NCU03975
M01879_2.00
Neurospora crassa
NNRCWYDDNN

NNHHRWGYNN
PBM
Weirauch et al.(2014)
pTH9677
0.798 0.935
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EEY21963 C2H2 ZF 26 48
EEY21963 C2H2 ZF 54 78
EEY21963 C2H2 ZF 84 106
EEY21963 C2H2 ZF 112 136

Links

Other C2H2 ZF family TFs
Other Verticillium alfalfae TFs

Invalid Input OrderBy

131 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action